Gene Nwi_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1064 
Symbol 
ID3676440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1163558 
End bp1165366 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content65% 
IMG OID637712614 
ProductABC transporter, transmembrane region 
Protein accessionYP_317678 
Protein GI75675257 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.415501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.35627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CTCCGAAGAA AATCACCGAT GACCCCTATG GCGCGGCCAT CCTTATCCGC 
CGCCTGGTCA CGGAACAGGG CATGGCCTAT TGGCGGCGCT ACCTCGCCGC ATTCGCGCTG
ATGGCCGTCT CCGCGGCGGC GACGGCGACG TCGGCCTACC TGCTCGGTGA GGTCATCAAT
CAGGCTTACG TGGACCGCAA CGTGCGCGGC ATTTTCATGC TGTCCACCGT GGTGCTCGCC
ATCTTCGTGG CCAAGGGCGC GGCGACCTAC GGTCATTCCG TGATCCTGTC CCAGATCAGC
AACGCGATCC TCGCCAATAA TCAGCGCCGC TTGTTCGCCA AGCTGATGAG CGAGAGCATC
GGCTATTTCT CGCAACGGCA TTCATCGGAA TTTCTCGCGC GGCTCACGGC CGGCGCGACC
TCGGTGACGC AGGTGCTCAG CCTGCTGATC AACGCGGTGG GGCGCGATCT GCTGTCGCTG
ATCGCACTCG TCACCGTGAT GGTGATGCAG GATCCCTATA TGTCGCTGTT TGGCGCGCTG
GTGGCGCCGC CCGCGATGAT CGTACTGCGC AAGCTGGTGA AGCGCATCAA GGGACTGGCG
CACAGCCAGT TCCATGGCAC CGCCGATATC ATGGAGACGA TGCAGGAGTC GCTGCAAGGC
ATTCGGACCG TCAAGGCGTT CACGCTCGAA CAGACCATGC GCGAGCGGAT CGACGCCAGC
ATCACCGCCG TCGAGCAGAC CAACAACAAG ATGGCGCGGG TTTCGAACCG CGCCAGCCCG
CTGATGGAAA CGCTCGGCGG TTTCGCCATC GCCGGCGGAC TGATGTATGG CGGCTATCGC
GTCGTCGCCA TGGGCGCGAC GCCGGGCCAG TTCTTTTCCT TCCTCACCGC CTTCCTGCTG
GCCTATGAGC CCGCCAAGCG GCTGGCCCGT CTCAACATCG AACTCAACAG CAGCCTGATC
GGCGCGCGCA AGCTGCTTGA GATCGTGGAC AGCCCCGCCA GCGAACCCGA CGACAGCGAC
AAGCCGGCGC TGCAACTGAC CGACGCCCGC GTCGAGTTGC GGGATGTCAC ATTCGCCTAT
CGCCCGGACG AGCCCGTGCT CAAGCGCATG AGCTTCATCG CGGAGCCGGG CAGGATGACG
GCGCTGGTCG GCCCCTCGGG CGGCGGAAAA TCAACCGTGC TGGCGCTGCT GCTGCGCCTG
TATGAAGTCA CCGACGGCGA CATCCTGATC GACGGGCAGT CCATCTCCGG CGTGTCGCGG
ACATCGCTGC GCCGGCAGAT GTCCTATGTC GGCCAGGACG TCTACCTGTT CCGCGCCACG
ATCCGCGAGA ATATCGCGTT CGGCCGCCCT GGCGCTACCG AGGACGAGAT CGTCGCGGCG
GCGAAAGCCG CCTGCGCCCA CGACTTCATC ACGGGCTTTC CGCTCGGCTA CGACACTCCC
GTGGGCGAGC ACGGCACCCA GCTCTCCGGC GGGCAGCGCC AGCGCATCGC CGTCGCCCGC
GCGCTGATCA AGGACGCGCC GATCATCCTG CTCGACGAGG CCACGGCCGC GCTCGATTCG
GAATCCGAAA AGCAGGTGCA GGAGGCGATC GAGCATCTGT GCCGAAATCG CACCACGATC
GTGATCGCTC ACCGCCTGCA CACCATCATG CACGCCGACG CCATTCTCGT GGTCGAGAAC
GGCGAGATCG TCGAGCGCGG ACGCCACGAC GATCTTCTGC GAAGCGGCGG GCGCTATGCT
TCGTTCTTTC GCCTGCAACA CCGGGAGACA GCGCCGCTGA CGCTGGCTCC CTTGAGCGCG
TCGGCGTAG
 
Protein sequence
MTEPPKKITD DPYGAAILIR RLVTEQGMAY WRRYLAAFAL MAVSAAATAT SAYLLGEVIN 
QAYVDRNVRG IFMLSTVVLA IFVAKGAATY GHSVILSQIS NAILANNQRR LFAKLMSESI
GYFSQRHSSE FLARLTAGAT SVTQVLSLLI NAVGRDLLSL IALVTVMVMQ DPYMSLFGAL
VAPPAMIVLR KLVKRIKGLA HSQFHGTADI METMQESLQG IRTVKAFTLE QTMRERIDAS
ITAVEQTNNK MARVSNRASP LMETLGGFAI AGGLMYGGYR VVAMGATPGQ FFSFLTAFLL
AYEPAKRLAR LNIELNSSLI GARKLLEIVD SPASEPDDSD KPALQLTDAR VELRDVTFAY
RPDEPVLKRM SFIAEPGRMT ALVGPSGGGK STVLALLLRL YEVTDGDILI DGQSISGVSR
TSLRRQMSYV GQDVYLFRAT IRENIAFGRP GATEDEIVAA AKAACAHDFI TGFPLGYDTP
VGEHGTQLSG GQRQRIAVAR ALIKDAPIIL LDEATAALDS ESEKQVQEAI EHLCRNRTTI
VIAHRLHTIM HADAILVVEN GEIVERGRHD DLLRSGGRYA SFFRLQHRET APLTLAPLSA
SA