Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1064 |
Symbol | |
ID | 3676440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 1163558 |
End bp | 1165366 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637712614 |
Product | ABC transporter, transmembrane region |
Protein accession | YP_317678 |
Protein GI | 75675257 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.415501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.35627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC CTCCGAAGAA AATCACCGAT GACCCCTATG GCGCGGCCAT CCTTATCCGC CGCCTGGTCA CGGAACAGGG CATGGCCTAT TGGCGGCGCT ACCTCGCCGC ATTCGCGCTG ATGGCCGTCT CCGCGGCGGC GACGGCGACG TCGGCCTACC TGCTCGGTGA GGTCATCAAT CAGGCTTACG TGGACCGCAA CGTGCGCGGC ATTTTCATGC TGTCCACCGT GGTGCTCGCC ATCTTCGTGG CCAAGGGCGC GGCGACCTAC GGTCATTCCG TGATCCTGTC CCAGATCAGC AACGCGATCC TCGCCAATAA TCAGCGCCGC TTGTTCGCCA AGCTGATGAG CGAGAGCATC GGCTATTTCT CGCAACGGCA TTCATCGGAA TTTCTCGCGC GGCTCACGGC CGGCGCGACC TCGGTGACGC AGGTGCTCAG CCTGCTGATC AACGCGGTGG GGCGCGATCT GCTGTCGCTG ATCGCACTCG TCACCGTGAT GGTGATGCAG GATCCCTATA TGTCGCTGTT TGGCGCGCTG GTGGCGCCGC CCGCGATGAT CGTACTGCGC AAGCTGGTGA AGCGCATCAA GGGACTGGCG CACAGCCAGT TCCATGGCAC CGCCGATATC ATGGAGACGA TGCAGGAGTC GCTGCAAGGC ATTCGGACCG TCAAGGCGTT CACGCTCGAA CAGACCATGC GCGAGCGGAT CGACGCCAGC ATCACCGCCG TCGAGCAGAC CAACAACAAG ATGGCGCGGG TTTCGAACCG CGCCAGCCCG CTGATGGAAA CGCTCGGCGG TTTCGCCATC GCCGGCGGAC TGATGTATGG CGGCTATCGC GTCGTCGCCA TGGGCGCGAC GCCGGGCCAG TTCTTTTCCT TCCTCACCGC CTTCCTGCTG GCCTATGAGC CCGCCAAGCG GCTGGCCCGT CTCAACATCG AACTCAACAG CAGCCTGATC GGCGCGCGCA AGCTGCTTGA GATCGTGGAC AGCCCCGCCA GCGAACCCGA CGACAGCGAC AAGCCGGCGC TGCAACTGAC CGACGCCCGC GTCGAGTTGC GGGATGTCAC ATTCGCCTAT CGCCCGGACG AGCCCGTGCT CAAGCGCATG AGCTTCATCG CGGAGCCGGG CAGGATGACG GCGCTGGTCG GCCCCTCGGG CGGCGGAAAA TCAACCGTGC TGGCGCTGCT GCTGCGCCTG TATGAAGTCA CCGACGGCGA CATCCTGATC GACGGGCAGT CCATCTCCGG CGTGTCGCGG ACATCGCTGC GCCGGCAGAT GTCCTATGTC GGCCAGGACG TCTACCTGTT CCGCGCCACG ATCCGCGAGA ATATCGCGTT CGGCCGCCCT GGCGCTACCG AGGACGAGAT CGTCGCGGCG GCGAAAGCCG CCTGCGCCCA CGACTTCATC ACGGGCTTTC CGCTCGGCTA CGACACTCCC GTGGGCGAGC ACGGCACCCA GCTCTCCGGC GGGCAGCGCC AGCGCATCGC CGTCGCCCGC GCGCTGATCA AGGACGCGCC GATCATCCTG CTCGACGAGG CCACGGCCGC GCTCGATTCG GAATCCGAAA AGCAGGTGCA GGAGGCGATC GAGCATCTGT GCCGAAATCG CACCACGATC GTGATCGCTC ACCGCCTGCA CACCATCATG CACGCCGACG CCATTCTCGT GGTCGAGAAC GGCGAGATCG TCGAGCGCGG ACGCCACGAC GATCTTCTGC GAAGCGGCGG GCGCTATGCT TCGTTCTTTC GCCTGCAACA CCGGGAGACA GCGCCGCTGA CGCTGGCTCC CTTGAGCGCG TCGGCGTAG
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Protein sequence | MTEPPKKITD DPYGAAILIR RLVTEQGMAY WRRYLAAFAL MAVSAAATAT SAYLLGEVIN QAYVDRNVRG IFMLSTVVLA IFVAKGAATY GHSVILSQIS NAILANNQRR LFAKLMSESI GYFSQRHSSE FLARLTAGAT SVTQVLSLLI NAVGRDLLSL IALVTVMVMQ DPYMSLFGAL VAPPAMIVLR KLVKRIKGLA HSQFHGTADI METMQESLQG IRTVKAFTLE QTMRERIDAS ITAVEQTNNK MARVSNRASP LMETLGGFAI AGGLMYGGYR VVAMGATPGQ FFSFLTAFLL AYEPAKRLAR LNIELNSSLI GARKLLEIVD SPASEPDDSD KPALQLTDAR VELRDVTFAY RPDEPVLKRM SFIAEPGRMT ALVGPSGGGK STVLALLLRL YEVTDGDILI DGQSISGVSR TSLRRQMSYV GQDVYLFRAT IRENIAFGRP GATEDEIVAA AKAACAHDFI TGFPLGYDTP VGEHGTQLSG GQRQRIAVAR ALIKDAPIIL LDEATAALDS ESEKQVQEAI EHLCRNRTTI VIAHRLHTIM HADAILVVEN GEIVERGRHD DLLRSGGRYA SFFRLQHRET APLTLAPLSA SA
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