| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1062 |
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| Symbol | |
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| ID | 3675715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1160504 |
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| End bp | 1162654 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637712612 |
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| Product | NAD-dependent DNA ligase |
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| Protein accession | YP_317676 |
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| Protein GI | 75675255 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.759691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.781607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGCCA AGTCAAAAAC GCCTCCGCCC GTCGATTCCC TCACCAGGTC GCAGGCCAGG
GTCGAGCACA AGAGGCTGGC GCTTGAGATC GAGACGCATA ACGAGCGCTA CTACCAGCAG
GACGCGCCAA CGGTCTCCGA CGCTACCTAC GACGCGTTGC AGCGGCGGCT CGAAGCGATC
GAGGCCCGCT TTCCGGACCT CGTCACCGCA AGTTCGCCCA CGCAGACGGT CGGCGCCGCG
CCCGCGCGCG GCTTCGCGAA AGTGCAGCAT GCGGTGCCGA TGCTGTCGCT CGGCAACGCC
TTCAGCGACG CTGAGGTTGC CGAGTTCGTC GAGCGCATCC GGCGTTTTCT GAAACTTGGT
GCGGATGACA TGCCCGCCAT CGTTGCCGAG CCGAAGATCG ATGGATTGTC GCTGTCGTTG
CGTTACGAGA ACGGCGACCT GGTGCGCGCG GCGACGCGCG GCGACGGCTT CACCGGCGAG
GACGTGACCG CGAATGTCCG CACCATCGCG GACGTGCCGC ACAAACTGAA CGGCCACAAC
ATCCCCACCG CCTGCGAGCT GCGCGGCGAG GTCTATATGC TGAAAGAGGA CTTCCTTGCT
CTGAATAAAA AGCAGCAAGA GGCTGGCGAT ACCGTGTTCG CCAATCCGCG CAATTCGGCG
GCCGGTTCTT TGCGCCAGAA GGATGTATCG ATCACCGCCT CGCGTCCGTT GAAGTTCTTC
GCCTATGCCT GGGGCGAGAT GACTGATCGG CCCGCCGAAA CCCAGAACGA CATGCTGGAG
TGGCTCAGGG ACGTTGGCTT TATCGTCAAT CCGCTGATCC AGCTATGTCA CAGCGTCGAT
GAGGTGCTGG CGTTTTATCG CCGCATCGGT GAGCAACGCG CCACGCTCGG CTACGACATC
GACGGCGTGG TCTACAAGGT GGACCGGCTC GACTGGCAGG AACGCCTCGG CTTCGTGTCG
CGAAGCCCGC GCTGGGCGAT CGCACACAAG TTCGCCGCCG AACAGGCGAT GACGATCCTC
AGGGGCATCG ACATCCAGGT CGGCCGGACC GGCGCGATGA CGCCGGTGGC GCGGCTCGAA
CCCGTCACCG TCGGTGGCGT GGTGGTGCAG AATGCCACGC TGCACAATGA GGATTACATC
AGGGGCCTCG GCAACGATGG TCAGCCGATC CGCGACGGTA TTGACCTTCG CATCGGCGAT
ACCGTGGTGG TGCAGCGCGC CGGCGATGTG ATTCCGCAAG TGGTCAGCGT GATCATCGAA
AAACGCCCGG CGAACGCTAA GCGATATGAG TTTCCCGACA GGTGTCCGAT CTGCGGCAGC
CACGCCGTGC GCGAGGAGGG CGAGGCGGTG CGCCGTTGCA CCGGCGCGCT GATCTGCCCG
GCGCAGGCGG TGGAGCGGCT CAAGCATTTC GTCTCGCGCC TTGCTTTCGA CATCGACGGC
CTCGGCGAAA AGCAGATACA GGAATTCTAT GACGACGGCC TTGTCATGCA CCCGGTCGAT
ATCTTCACGT TGCAGGAGCG CGACGCGCGT GCGGAGAACA AGCTGCGCGA TCGCGACGGC
TATGGCGATG TGTCGGTGCG CAACCTGTTC GCCGCGATCG ACGCTCGCCG CAGGATCGAA
CTCAACCGGC TGATCTTCGC GCTCGGCATC CGCCACGTCG GCGAGGGCAA TGCCAAGCTG
CTGGCGCGAC ACTATGGCAG TATCGAAAGT TTCCGCAGCG CCATGACGGA GGCCGCGGCG
GCGCAGACGG AAGCAGGCAA TGATTCCGAG GCCTATGCCG ATCTTACCAA CATCGGAGGC
ATCGGCGATA TCGTTGCCGA CGCGGTGGTC GAGTTCTTTG CCGAGCCGCG CAACGTCAAG
GCGCTGAACG ATCTGCTTGA AGAAATCGAA GTGCTGCCGG TCGCGCAGGC CCGCAGCGAC
TCGGCCGTGG CGGGCAAGAC CGTGGTGTTC ACAGGCTCGC TGGAAAAATT CACGCGCGAT
GAAGCAAAAG CATCGGCCGA GCGCGTGGGC GCGAAAACGT CCAGCTCGGT GTCGAAGAAG
ACCGATCTGG TCGTCGCAGG TCCCGGAGCC GGATCGAAGC TCAAGGATGC CGAGAAGTTC
GGCGTGAAAG TAATCTCCGA GGACGAGTGG CTGAAGCTGA TCGAAGGATA G
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| Protein sequence | MAAKSKTPPP VDSLTRSQAR VEHKRLALEI ETHNERYYQQ DAPTVSDATY DALQRRLEAI
EARFPDLVTA SSPTQTVGAA PARGFAKVQH AVPMLSLGNA FSDAEVAEFV ERIRRFLKLG
ADDMPAIVAE PKIDGLSLSL RYENGDLVRA ATRGDGFTGE DVTANVRTIA DVPHKLNGHN
IPTACELRGE VYMLKEDFLA LNKKQQEAGD TVFANPRNSA AGSLRQKDVS ITASRPLKFF
AYAWGEMTDR PAETQNDMLE WLRDVGFIVN PLIQLCHSVD EVLAFYRRIG EQRATLGYDI
DGVVYKVDRL DWQERLGFVS RSPRWAIAHK FAAEQAMTIL RGIDIQVGRT GAMTPVARLE
PVTVGGVVVQ NATLHNEDYI RGLGNDGQPI RDGIDLRIGD TVVVQRAGDV IPQVVSVIIE
KRPANAKRYE FPDRCPICGS HAVREEGEAV RRCTGALICP AQAVERLKHF VSRLAFDIDG
LGEKQIQEFY DDGLVMHPVD IFTLQERDAR AENKLRDRDG YGDVSVRNLF AAIDARRRIE
LNRLIFALGI RHVGEGNAKL LARHYGSIES FRSAMTEAAA AQTEAGNDSE AYADLTNIGG
IGDIVADAVV EFFAEPRNVK ALNDLLEEIE VLPVAQARSD SAVAGKTVVF TGSLEKFTRD
EAKASAERVG AKTSSSVSKK TDLVVAGPGA GSKLKDAEKF GVKVISEDEW LKLIEG
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