| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1060 |
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| Symbol | |
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| ID | 3677019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1157771 |
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| End bp | 1158667 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637712610 |
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| Product | putative lipoprotein |
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| Protein accession | YP_317674 |
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| Protein GI | 75675253 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.648337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCG GACGGCGCGT TTTCATGGAC CGCGCCTCTC TCGGGCGGCT TGGCCGGAAA
CTGCGGCTCG CCGCCTGTCT TGCACTCGCC GCCGTGACCG TTGCCGCGTG CGGGACCGGG
CCGCTCCTGG ACAAGTTCAC GGCGAAGGAC GAAGAGACCT TCAGCGACGA ACCGGCGGAC
AAGCTCTACA ATGAGGGCTT GTTCCTCATG AACAAACAGC GCGATCTCAA GGCGGTCACG
AAGAAGTTCG ACGAGGTCGA CCGCGAACAC CCGTATTCGG AGTGGGCGCG GAAGTCGCTG
CTGATGTCGG CCTACGCATC TTATCAGGCC GGCGATTACG ACACCTGCAT CGGCTCCGCG
TCGCGCTACG TGACGCTCCA TCCGGGCAGT CCGGACGCCG CCTATGCGCA GTATTTGATT
GCCGTCTCTA ATTACGATCA GATCGCCGAT GTCTCGCGCG ACCAGGCTCG TACCGAGAAG
GCGATGCGCA CCCTGGAAGA GGTGATCCGG AAATATCCGA CGTCCGAATA CGCCGGTGAA
GCCAAGAAGA AGCTTCAGGG CGCGCGCGAT CAGCTCGCCG GCAAGGAAAT GGCGGTCGGC
CGCTACTACA TGGAGCGGCG TGACTATACC GGCGCGATCA ACCGCTTCAA GACGGTGGTG
ACGCGCTTCC AGACCACGCG GCACGTCGAG GAGGCGCTGG CGCGGCTGAC CGAGGCCTAC
ATGGCGATTG GAATCGTTGC CGAGGCGCAG ACCGCCGCGG CCGTGCTTGG CCATAATTTC
CCTGACAGCC ACTGGTACAA GGACGCCTAC AATCTCGTGA CCTCGGGTGG AAGCCAGCCC
AGCGAGAACA AGAGTTCGTG GATCAGCAAG GCGTTCAGGA AGGTGGGCCT TGGCTAG
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| Protein sequence | MALGRRVFMD RASLGRLGRK LRLAACLALA AVTVAACGTG PLLDKFTAKD EETFSDEPAD
KLYNEGLFLM NKQRDLKAVT KKFDEVDREH PYSEWARKSL LMSAYASYQA GDYDTCIGSA
SRYVTLHPGS PDAAYAQYLI AVSNYDQIAD VSRDQARTEK AMRTLEEVIR KYPTSEYAGE
AKKKLQGARD QLAGKEMAVG RYYMERRDYT GAINRFKTVV TRFQTTRHVE EALARLTEAY
MAIGIVAEAQ TAAAVLGHNF PDSHWYKDAY NLVTSGGSQP SENKSSWISK AFRKVGLG
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