| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1055 |
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| Symbol | |
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| ID | 3677014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1150386 |
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| End bp | 1151378 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637712605 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_317669 |
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| Protein GI | 75675248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATCA CCATTCTGTT CGGCGGCAGC AACAAGGAGC GTCTGGTTTC AGTCGCGAGC
GCGCAGGCGC TCCATCACGC ATTGCCGGAG GCCGATCTGT GGTTCTGGAA CCTTCGCGAT
GAAATCGTCG ACGTGCGATC CGAAACGCTG CGGGATCATG CGCGGCCGTT CGAGGACGAG
TTCGTTCCCG GCGGATCAGG CGCGCCGCTG GAGCGGGCGC TGGACAGGGC CAGGGCGGAG
GATCGCGTGC TGGTGCTCGG CCTCCACGGA GGCCGCGCCG AGAACGGTGA ACTTCAGGCG
ATGTGCGAGC TTCGCCGAAT TCCTTTCACG GGATCGGGTT CGGCCGCCTC GCATCTTGCG
TTCGACAAGG TGGCGGCCAA GCGGTTCGTG GCCTCGGCCG GGGTCCCCAC GCCGGCGCAC
GTCTTGCTGG AGGACATTGA CCACGCGCTG GCCGAACACG GCCGGCTGGT TGCCAAGCCC
GCATGCGACG GATCGAGCTA TGGCCTGATC TTCGTCAACG CGCCGCAGGA TATCGTCACC
GTCCGCGAGG CGGCGAAGAC CGAGGACTAT GTGATCGAAC CTTTCGTGTC TGGCGTCGAG
GCGACCTGCG GCGTGCTGGA GCATTCCGAC GGCTCGGTCG TCGCGCTTCC GCCGGTCGAG
ATCGTGCCGG CCGAGGGCGC GTTCGATTAC GCCGCGAAGT ATCTGGCGAA GACGACGCAG
GAGATCTGTC CGGGACGTTT TTCGCCGGAG ATCGCCGCGC AGATCATGGA TCACTCGCTG
CGGGCGCATC GCGCGTTGTC CTGCCGCGGC TATTCCCGCA CCGACTTTAT CGTGACAGGC
AATGGACCGA TCTATCTGGA AACCAACACC CTGCCGGGCC TGACCGCGGC CTCGCTTTAC
CCCAAGGCGC TTCATGCGCA GGGGGTCGGG TTCGCTGATT TTCTGCGCGA CCAGATCGTG
CTCGCCGAAA AGGCCGTCCG TCCGAACCTC TAG
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| Protein sequence | MRITILFGGS NKERLVSVAS AQALHHALPE ADLWFWNLRD EIVDVRSETL RDHARPFEDE
FVPGGSGAPL ERALDRARAE DRVLVLGLHG GRAENGELQA MCELRRIPFT GSGSAASHLA
FDKVAAKRFV ASAGVPTPAH VLLEDIDHAL AEHGRLVAKP ACDGSSYGLI FVNAPQDIVT
VREAAKTEDY VIEPFVSGVE ATCGVLEHSD GSVVALPPVE IVPAEGAFDY AAKYLAKTTQ
EICPGRFSPE IAAQIMDHSL RAHRALSCRG YSRTDFIVTG NGPIYLETNT LPGLTAASLY
PKALHAQGVG FADFLRDQIV LAEKAVRPNL
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