Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1049 |
Symbol | murD |
ID | 3674872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 1143542 |
End bp | 1144942 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637712599 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_317663 |
Protein GI | 75675242 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0148666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCCG TCACATCCTT TTCCGGCAAG ACCGTCGCGG TATTTGGCCT CGGCGGTTCG GGCCTTGCGA GTTGTCACGC CCTGAAGGCG GGCGGCGCCG AGGTGATTGC GGGCGACGAC AACGCCGACA ATCTCGCGAA GGCGGCGCAG GCCGGTTTCA TCACCGCGGA TTTGCGAACC GTGGTGTGGG CGAACCTCGC CGCGCTGGTG CTTGCGCCGG GCGTGCCGCT GACGCATCCC TCGCCGCACT GGAGCGTGCT GGCGGCGCGG CAGGCGGGCG TCGAGGTGAT CGGCGACGTC GAACTGTTCT GCCGCGAGCG CGCACGTCAT GCGCCCGACG CGCCTTTCAT CGCCATCACC GGCACCAACG GCAAGTCCAC TACGACGGCG CTGGTCGCGC ATCTGATGCG CGAGGCCGGA TACGACGTGC AGATGGGCGG CAACATCGGC ACCGCGATCC TGTCGCTGGA GCCGCCGCGC AGAGGGCGCG TGCATGTGAT CGAGATGTCG TCGTACCAGA TCGACCTCGC GCCCTCGCTC GATCCGACCG TCGGCATTCT GCTCAACCTC AGTCCCGATC ACCTCGATCG CCACGGCACC ATCGAACATT ATGCGCAGGT GAAGGAGAGG CTCATCGCCG GGGTGCAGCC GCAGGGCACG GCGGTCGTCG GCGTCGATGA TCACTGGTGC GCGGCGATCG CCGACCGTCA GGAGCAGGCC GGACGCAGCG TCGTGCGCGT GTCGGTGAAG CGGCCACTGG CGCATGGCGT CAGCGTCGAA CAGGACAGGA TCGTTCTCGT GTCCGGCGGC GCGCGCAGCG AAATCGCCGA CATCGGCGGA ATAGGCTCGC TGCGCGGGCG GCACAACGCG CAGAATGCGG CCTGCGCTTC GGCGGGGGCG CTGGCGCTCG GGGTCAGCCG GGACATCCTG CAGCAGGACT TGCGCAGTTT TCCCGGTCTC GCGCATCGCA TGGAGCAGGT GGGGCGCAAG GCCCATGTGC TGTTCGTCAA CGACTCCAAG GGCACCAACG CCGACGCCAC CGAGAAGGCG TTGTCGTCCT TCGACGAGAT TTTCTGGATC GCGGGCGGCA AGCCGAAAAG CGGCGGTATC GCCTCGCTCG ACGCGTTCTT TCCGCGCATC CGCAAAGCCT ATCTGATCGG AGAGGCGGCG CAGGAGTTCG CGGCGACGCT GGAGGGCAAG GTGGCCTACG AGATCAGCGG AACGCTGGAA GCCGCGGTGC CCGCCGCCGC GCGGGACGCG GAAGGAGCAG GCCGTGCCGG GGCGGTGGTG CTGTTGTCGC CGGCCTGCGC TTCATTCGAT CAGTTTCGCA ATTTTGAAGT TCGCGGCGAT CGCTTTCGCG AACTGGTCCA GGCGTTGCCG GGCGTTACGC CCGTCGTGTA G
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Protein sequence | MIPVTSFSGK TVAVFGLGGS GLASCHALKA GGAEVIAGDD NADNLAKAAQ AGFITADLRT VVWANLAALV LAPGVPLTHP SPHWSVLAAR QAGVEVIGDV ELFCRERARH APDAPFIAIT GTNGKSTTTA LVAHLMREAG YDVQMGGNIG TAILSLEPPR RGRVHVIEMS SYQIDLAPSL DPTVGILLNL SPDHLDRHGT IEHYAQVKER LIAGVQPQGT AVVGVDDHWC AAIADRQEQA GRSVVRVSVK RPLAHGVSVE QDRIVLVSGG ARSEIADIGG IGSLRGRHNA QNAACASAGA LALGVSRDIL QQDLRSFPGL AHRMEQVGRK AHVLFVNDSK GTNADATEKA LSSFDEIFWI AGGKPKSGGI ASLDAFFPRI RKAYLIGEAA QEFAATLEGK VAYEISGTLE AAVPAAARDA EGAGRAGAVV LLSPACASFD QFRNFEVRGD RFRELVQALP GVTPVV
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