| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1047 |
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| Symbol | |
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| ID | 3674870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1140913 |
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| End bp | 1142343 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637712597 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase |
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| Protein accession | YP_317661 |
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| Protein GI | 75675240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0170632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC GCCCGTTGTG GACGTTGGAC GAAATGGCCG CGGCGATGCG CGCGGAAGGG
CGAGGGACCT TGCCCGCAGC GATCACCGGC ATTTCCATCG ACAGCCGCAC CGTTGCGCCG
GGCGAGGCTT ATTTCGCGAT CAAGGGCGAT GTGCATGACG GCCACGCTTT CGTTGGTGCC
GCCTTGAAGG CGGGCGCGGC GCTGGCGGTG GTCGAGGCCG CGCGGCGCGA TCAGTTCGCC
CTTGAGTTGC CGTTGCTGGT CGTCGATGAC GTGCTTGCAG CCTTGCGCGA TCTGGCGCGG
GCGTCGCGCG CGCGCCTCGC CGCTCAGGTG ATCGCGGTGA CGGGCTCCGT CGGCAAGACT
TCCACAAAGG AGGCGCTGCG CGGTGTCCTA GGCGCGCAGG GCAAGACCCA CGTCTCGGTG
GCTTCGTTCA ACAACCACTG GGGCGTGCCG CTGTCGCTGT CGCGCTGTCC GGCGGACGCG
CGCTTCGCGG TCTTCGAGAT CGGGATGAAT CATGCCGGCG AGATCACGCC GCTGGTGAAG
ATGGTGCGGC CGCATGTGGC GATCATCACC ACGGTCGAGC CCGTGCATCT CGAATTCTTC
TCCGGCGTCG AGGCGATCGC CGACGCCAAG GCGGAAATTT TCGAAGGCGT GGAGCCGGAC
GGCGCCGTCG TGCTCAACCG TGATAACGCG CAGTTCGCGC GGTTGCAGGA ATGCGCCAGG
AAACTCGGCA TCGCGAAGAT CGTCACCTTC GGCGCGGACG AGAAGGCCGA TGCGCGCCTG
CTCGATCTGG CGTTGCATCC GGCTGGCTCG GCCGTGCACG CTGAAATCCT CGGCAGTGAG
TTGACCTACA AGCTCGGCAT GCCCGGCCGT CACATGGCGA TGAATTCGCT CGCGGTGCTG
GCGGCGGCGT CGCTGGCCGG CGCTGATCTT GCGCTTGCGG GTCTTGCGCT GTCGCAGGCG
CAGCCGGCCG CGGGACGCGG CGTGCGTCGG GCGCTGGCCG TGAGGGGCGG CGAGGCGCTC
CTGATCGATG AGAGCTATAA CGCCAATCCT GCTTCGATGG CGGCGGCGCT GAACGTGCTC
GGCGAGGCCA AAGTCGGGAC GCAGGGTCGG CGCATCGCGG TGCTGGGCGA CATGCTGGAG
CTTGGTCCCA GAAGCGCGGA CCTGCATCGC GACCTGACCG GGGCGATCGA TGCCAATGAC
GTCGACATGA TATTTTGCTG CGGTCCCCTG ATGCGCAATC TGTGGAATGC GCTTTCCTCC
GGTAGGCGGG GCGGTTATGC AGAGGACGCC GCCGCGCTCG AATCGCAGGT GACGGCGGCG
ATCCGTTCCG GTGACGTCAT CATGGTCAAG GGCTCGCTGG GATCGCGGAT GAAAGTGATC
GTGACCGCGC TCGAGAGGCG ATATTCCGGC AGCGCGGCTG AAATTCTGTA A
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| Protein sequence | MSARPLWTLD EMAAAMRAEG RGTLPAAITG ISIDSRTVAP GEAYFAIKGD VHDGHAFVGA
ALKAGAALAV VEAARRDQFA LELPLLVVDD VLAALRDLAR ASRARLAAQV IAVTGSVGKT
STKEALRGVL GAQGKTHVSV ASFNNHWGVP LSLSRCPADA RFAVFEIGMN HAGEITPLVK
MVRPHVAIIT TVEPVHLEFF SGVEAIADAK AEIFEGVEPD GAVVLNRDNA QFARLQECAR
KLGIAKIVTF GADEKADARL LDLALHPAGS AVHAEILGSE LTYKLGMPGR HMAMNSLAVL
AAASLAGADL ALAGLALSQA QPAAGRGVRR ALAVRGGEAL LIDESYNANP ASMAAALNVL
GEAKVGTQGR RIAVLGDMLE LGPRSADLHR DLTGAIDAND VDMIFCCGPL MRNLWNALSS
GRRGGYAEDA AALESQVTAA IRSGDVIMVK GSLGSRMKVI VTALERRYSG SAAEIL
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