Gene Nwi_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1009 
Symbol 
ID3677235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1104130 
End bp1106100 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content64% 
IMG OID637712558 
Producthypothetical protein 
Protein accessionYP_317623 
Protein GI75675202 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2982] Uncharacterized protein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.526606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTG ACGATGACCC AAGGACGATG GCCCAAGGAA TGAAGCGCCT GGGAATATCG 
GTCGCGGCCA TTCTGGGAGT TGCGGTGATC GGCCTGACGG GGCTGATCTC CATGTCTCGC
CTGCTCGACC ACGATGCCCT CCGAGACGCC GTCGAAACCC AAATCCGAAC GGTGACGGGG
CTCGACTTCG TCGCGGACGG CCGCATCGAC GTCTCGGTTT TTCCGGGCAG CTATGTTTCC
TTCCATGATG TCCGCATCAA GGGCGGCGAC GCCGATGCGC CAGCGCTCAG CGTCGAGGCG
CTGACCGCCA ATCTGCGCCT GTTTCCGCTG CTCATGCAGC GGTTCCAGAT CGCCGACGTC
ATGTTGCTCC ACCCTCACAT CCGCGTTAGG CGCGCTGCCG ACGGCCGAAG CAACTGGACC
CCCTTCATGG AAACGATTGC GCGGAACATG AAGCCCGGCG CCGACAACCC GCTCTCGTTC
TCGGAAATCC GAATCCAGAA TGGCGAACTC AGCTATGAAG ACGGCGACGG CAGGATTTCC
GAAAATCTCC ACGGTATCGA CCTTTCGCTG GCGTGGCCCT CGATTTCCCG CTCGTTCGCA
GCGACCGGAC AATTCGACTG GCGTGGAGAG CGTGTCGACG GCAGCATCAG CCTCGGCGAC
TTTCTCGCGG CGCTATCAGG CGAGCGATCC GGCCTGAAGA TCAAGGTCGC CAGTCCCCGG
CTGAAGTTCG CGTTTGACGG CACGGTCGCC AATCCGGTCA GCCTGATCAT GGAAGGTACG
CTGTCCGCCG ACAGCACTTC CTTGCGCGAG GCGCTGCGGT GGATCGGGCA GCCTCCTCCC
GGCAGCGGCG GATTCGATCG TTTCTCGCTC AAGGCGCGCG CCAGCGTGAT CGGTTCGTCG
GTCGCGCTCA CCAACGTCAA CATCGAAATC GACGGTAACG TCGCCGAAGG CGTCATGACC
TACGCCAACA ACGGACGGCA GACCCTGCAG GCTACGCTGG CTGCCGGCAC GCTGGATTTC
ACGCCTTACG TCAAGACGAT CCGGCTGCTC GCCAGCGGGG CTCGCGACTG GAACCGGCAA
CTGTTCGATC TGCGCGCGCT GTCCGCCACT GACCTCGACA TGCGGCTTTC GGCGGCGAAG
GTCATCGTCG GATCCACCAG GCTGGGCAAA ACCGCGCTCG GCGCCAACCT TCGCAACGGA
TCGCTGGCGC TCAGCATCGG CGAGGCGCAA ATCTATGACG GCGTCGCGAA GGGATCGTTC
GCCATCTCGC ACGCCGAGGA AGCCGCCGAT GTGAAGGCGC AGTTTCAGCT TATCGACGTC
GATCTGCAAG CCTGCGTCAG CGATCTGTTC GGCACCGGCC GGCTCTCCGG ACGCGGCAAC
CTGAATGTTT CGCTTGAGGC CAGGGGATCG AGTCCGTACG GACTGGCGCA ATCGCTCGAC
GGGACAGCGG TTCTGAACGG TCACGACGGC GCCATCAGCG GATTCAATGT CGAGCAGTTG
CTGAAGCGGC TGGAGCGGCG GCCGCTCTCC GGCGGCGGCA GTTTCCGCAG CGGAAAGACA
CCCTTCGACA AGCTGAATGT CACCCTCAAT TTCGACGACG GAGTCGCCGT CGCGACCGAC
GTGCGCGTCG AAGGACCGGC GGCGCGTCTC ACCTTGACCG GCACGGCCTC GGTGCCTTCG
CGGGACTACG ATCTCAAGGG CACCGCAAGC CTGACTTCGG CTGCGGGAGC CGACAATTTC
GAACTGCCGT TCGTGGTGCA GGGGCCGTGG GACGATCCGC TGGTCTTCCC CGATCCTGAA
AGCCTGATAC GGCGGTCCAA GGCGTCAGCG CCGCTGCTCG ATGCGGTCAG GGACCGCAGG
GCTCGCGATG CGGTCCGCTC CGTGATCGAG CGTCTGACGG ATCATAAGCC GGTTCCGGAG
GCAGCCGTCC CCGATGCCGC GAGCGGGTCC GGGACATCGC ATTCGAACTG A
 
Protein sequence
MLIDDDPRTM AQGMKRLGIS VAAILGVAVI GLTGLISMSR LLDHDALRDA VETQIRTVTG 
LDFVADGRID VSVFPGSYVS FHDVRIKGGD ADAPALSVEA LTANLRLFPL LMQRFQIADV
MLLHPHIRVR RAADGRSNWT PFMETIARNM KPGADNPLSF SEIRIQNGEL SYEDGDGRIS
ENLHGIDLSL AWPSISRSFA ATGQFDWRGE RVDGSISLGD FLAALSGERS GLKIKVASPR
LKFAFDGTVA NPVSLIMEGT LSADSTSLRE ALRWIGQPPP GSGGFDRFSL KARASVIGSS
VALTNVNIEI DGNVAEGVMT YANNGRQTLQ ATLAAGTLDF TPYVKTIRLL ASGARDWNRQ
LFDLRALSAT DLDMRLSAAK VIVGSTRLGK TALGANLRNG SLALSIGEAQ IYDGVAKGSF
AISHAEEAAD VKAQFQLIDV DLQACVSDLF GTGRLSGRGN LNVSLEARGS SPYGLAQSLD
GTAVLNGHDG AISGFNVEQL LKRLERRPLS GGGSFRSGKT PFDKLNVTLN FDDGVAVATD
VRVEGPAARL TLTGTASVPS RDYDLKGTAS LTSAAGADNF ELPFVVQGPW DDPLVFPDPE
SLIRRSKASA PLLDAVRDRR ARDAVRSVIE RLTDHKPVPE AAVPDAASGS GTSHSN