Gene Nwi_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0955 
Symbol 
ID3674972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1048623 
End bp1049339 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID637712504 
Producthypothetical protein 
Protein accessionYP_317569 
Protein GI75675148 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03639] CRISPR-associated endonuclease Cas1, NMENI subtype 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.323915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.577843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGAC GCGTAGTGGA AGTCGCCGGC GACGGTCGTC ATCTCGCGAC CGAACGCGGC 
TTCATGATCG TGTCCGAGAA AGCCGGCGAA ATCGGCCGGG TGCCGCTGGA CGATGTCGCG
GCGGTGATCG CGAACGCGCA TGGCCTAACC TACTCGAACA ACCTGCTTGT CAATCTGGCG
GCTCGCGGCG TGCCGGTGGT TCTTTGCGGA GCCAATCACC GTCCCGCGGC CGTGGTGTGG
CCGGTCGACG GCCATCATGC GCAGGCCGGC CGCATGAGCG ATCAGGCCAA TGCGTCGGCT
CCGCTGAAAA AGCGGCTCTG GCAGCAGATC GTTCAGGCCA AGATCCTTGC GCAAGGCGCC
ACGCTTGCCG CGGTTGGAGC AGAGGCTGGA GGATTCAGGC TGCTGGCCCG CAAGGTGCGG
ACCGGCGATC CGGACAATGT CGAAGCCGAA GCGGCGCGGC GCTATTGGCG GCTTCTGCTC
GGATCTGACT TTCGACGAGA TCAGGACGGC GGCGGCATCA ATGGCCTGCT CAACTACGGC
TACGCGGTGC TGCGCGCCGC CACCGCGCGC GCTGTCATGG CTGCGGGCCT TCATCCCAGC
CTTGGGCTGA AACACTCGAA CCGAGGCAAT GCGCTTGTCC TGGTCGATGA CCTGATGGAG
CCGTTCCGCC CGGCGGTGGA CCGCGAAGTT CATCGACTTA GAGCCATTTT GGATTGA
 
Protein sequence
MVGRVVEVAG DGRHLATERG FMIVSEKAGE IGRVPLDDVA AVIANAHGLT YSNNLLVNLA 
ARGVPVVLCG ANHRPAAVVW PVDGHHAQAG RMSDQANASA PLKKRLWQQI VQAKILAQGA
TLAAVGAEAG GFRLLARKVR TGDPDNVEAE AARRYWRLLL GSDFRRDQDG GGINGLLNYG
YAVLRAATAR AVMAAGLHPS LGLKHSNRGN ALVLVDDLME PFRPAVDREV HRLRAILD