Gene Nwi_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0926 
Symbol 
ID3674388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1013607 
End bp1015685 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content65% 
IMG OID637712475 
Productpeptidase M3A and M3B, thimet/oligopeptidase F 
Protein accessionYP_317540 
Protein GI75675119 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACA CGTCTCAATC GTCGCCTGTC GTTTCCGGCT CCGGTACGGA CAACCCGCTG 
CTGATGCCGT GGCGGACGCC TTTCCAGGCC CCGCCGTTCG GGGAGATCGC GCCTGACCAC
TTCCTGCCCG CCTTTGAGCG AGCGTTCATC GATCATGCCG CCGAGATCGC CGCCATCGCC
CATGATCCGT CGGCGCCGGA CTTCGCCAAC ACCATCACCG CGCTGGAACG CTGCGGCAGG
CTGCTCGCGA AGGTCTCGGC CGTGTTTTAC AATCTGGTGT CGGCGCACTC CAATCCGGCG
CTGCTCGAGA TCGACAAGGA TGTCTCCTCG CGCATGGCGC GGCACTGGAA TCCGATCCTG
ATGAACGCGG TGTTGTTCGG CCGCGTCGCG CAGCTCCACG AGAATCGCGC AACGCTCGGA
CTGACCGCCG AACAGTCCCG GCTGCTGGAA CGCACCTACA CGCGCTTCCA CCGGGCCGGC
GCGGGTCTCG ACGAGACCGC GAAGGCGCGG ATGGCCACGA TCAACGAACG GTTGGCCGAT
CTCGGCACCA CCTTCGGCCA TCATCTCCTC GGCGACGAGC AGGAGTGGTT CCTCGAACTC
GGCGAGGACG ACATGGACGG CCTGCCGGAC AGCTTCGTTG CCGCGGCGCG CGCCGCGGCG
GAGGAGCGCG CGCTGCCCGG CAAGGCCATC GTGACCACCT CGCGCTCATC AGTGGAGACC
TTTCTCAAGA GCTCGCGCCG CCGCGATCTG CGCGAGAAGG TTTACAAGGC GTTCACCGCC
CGCGGCGACA ACGGCAACGC CAACGACAAC AACGCGGCCA TCGTGGAGAT CCTCGCGCTT
CGCGAGGAGG CTGCACGGCT TCTGGGCTAT CCCGCTTTCG CCGCCTATCG TCTGGAAGAC
TCGATGGCCA AGACGCCGGA AGCCGCGCGC GGCCTGCTGG AGCGGGTGTG GACGCCGGCC
CGCGCGCGGG CGCTCGCCGA TCGCGATGCC TTGCAGGGGC TGATCGCGGA GGAGGGCGGC
AACTTCACCC TCGCGCCCTG GGACTGGCGC TACTACGCCG AAAAACTGCG GCAGATCCGT
GCCGATTTCG ACGACGCGGC GATCAAGCCG TATCTGACGC TGGAGGGGAT GATCGCCGCG
GCCTTCGACT GCGCGCACCG GCTGTTCGGA CTCACCTTCT CCGAGCGCAA GGACATCCCG
GTCTGGCATC CGGACGTCCG CGTCTTTGAG GTGAAGGATG AGGCCGGCGC GCATCGGGCG
CTGTTCTACG GCGACTACTT CGCCCGCGCA TCGAAACGGT CCGGCGCATG GATGACCTCG
CTGCGCGACC AGCAGACGCT CGACGGTGAG ATCGCGCCGC TGGTCGTGAA CGTCTGCAAT
TTCGCCAAAG GCGCGGACGG CCAGCCCGCG CTGCTGTCTC CGGACGATGC GCGCACGCTG
TTCCATGAGT TCGGACATGG TCTGCACGGC ATGCTGTCGA ACGTCACCTA TCCTTCGTTG
TCGGGGACCA GCGTGTTTAC CGATTTCGTC GAACTGCCCT CGCAACTCTA CGAGCACTGG
CAGGAACAGC CGCAGGTGCT GCGACAGTTC GCAAGGCACT ACCAGACCGG AGAACCGCCG
CCGGACGATC TGCTGGAGCG TTTCCTTGCG GCGCGACAGT TCAACCAGGG TTTCGCCACC
GTCGAATTCG TCGCTTCGGC GCTGATGGAT CTGGAATTTC ACAGCCAACC CGCCGCGGCG
ATCCGCGATG TCAGGGCTTT CGAACGCGCC ACCATGGGAA AGATCGGGAT GCCGGCGGAA
ATCGCGATGC GGCACCGGCC GACTCAGTTC GGCCACATCT TCTCCGGCGA TCACTATGCG
GCCGGCTATT ACAGCTACAT GTGGTCGGAG GTGATGGACG CCGATGCGTT CGGGGCTTTC
GAGGAGACCG GCGATATTTT CGATCCGGAG ACCGCAAGGC GGCTGCACGA TGATATTTAC
TCGTCGGGCG GATCGCGCGA TCCGGAAGAA GCCTACATCG CCTTCCGCGG CCGCGGGCCG
AAGCCGGAGG CGCTGTTGCG GCGACGTGGA TTGCTATAG
 
Protein sequence
MSDTSQSSPV VSGSGTDNPL LMPWRTPFQA PPFGEIAPDH FLPAFERAFI DHAAEIAAIA 
HDPSAPDFAN TITALERCGR LLAKVSAVFY NLVSAHSNPA LLEIDKDVSS RMARHWNPIL
MNAVLFGRVA QLHENRATLG LTAEQSRLLE RTYTRFHRAG AGLDETAKAR MATINERLAD
LGTTFGHHLL GDEQEWFLEL GEDDMDGLPD SFVAAARAAA EERALPGKAI VTTSRSSVET
FLKSSRRRDL REKVYKAFTA RGDNGNANDN NAAIVEILAL REEAARLLGY PAFAAYRLED
SMAKTPEAAR GLLERVWTPA RARALADRDA LQGLIAEEGG NFTLAPWDWR YYAEKLRQIR
ADFDDAAIKP YLTLEGMIAA AFDCAHRLFG LTFSERKDIP VWHPDVRVFE VKDEAGAHRA
LFYGDYFARA SKRSGAWMTS LRDQQTLDGE IAPLVVNVCN FAKGADGQPA LLSPDDARTL
FHEFGHGLHG MLSNVTYPSL SGTSVFTDFV ELPSQLYEHW QEQPQVLRQF ARHYQTGEPP
PDDLLERFLA ARQFNQGFAT VEFVASALMD LEFHSQPAAA IRDVRAFERA TMGKIGMPAE
IAMRHRPTQF GHIFSGDHYA AGYYSYMWSE VMDADAFGAF EETGDIFDPE TARRLHDDIY
SSGGSRDPEE AYIAFRGRGP KPEALLRRRG LL