Gene Nwi_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0898 
Symbol 
ID3674342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp976580 
End bp977608 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content67% 
IMG OID637712449 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_317514 
Protein GI75675093 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.793849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAC CTCGCGCCAG AATGGCGCTT GCTGGCCGTC GCCCGATCCT GGTCACAGGT 
GGAAATGGAT TCATCGGACA ACATCTGGTT GCAGCGCTGC GCCGCAGGCA CGGCGTCGTG
CGCGTCCTGG ATCTGCAACC GCCGCCACCC GGACCCGTGC CGGAATTCAT CCAGGGAACG
ATCCTGGATC CGCACGATGT GCGGCGCGCT CTGGACGGCG TGGATACCGT GTATCATCTG
GCGGCGATCT CGCATCTGTG GACGGCGAAC CCCGCCGACT TCGAGCGCGT GAATCAACAT
GGCACCGAAC TCATGCTAGC GGCGGCGCGC GAGAGAGGGG TGCGCAACAT CGTTCACTGC
TCCACCGAAG CGATCCTGTT TCCCTATCGC AGGGGCGGCA CAACGATGCC GCAACGCGCG
GAAGACATGC CGGGGCCCTA TACGCGATCG AAGTTCATGG CCGAGCAGAT CGCGCGCGAG
GCGGCGGCCG ATGGACTGCG TGTCGTGATC GCCAATCCCA CCGTTCCCAT CGGGCCCGGC
GATCACAACT TTACCGAGCC GACGCGGATG CTCGACCTGT TCGCGCGCAA ATCGCCGCCG
ATGGTGCTGG ACTCGATGCT GAACCTCGTG GACGTGCGGG ACGTCGCGGC GGGGCTCATC
CTGGCCGGAG AGCGCGGCAG GGCGGGAGAG CGCTATATTC TCGGCGGCGA AAATGTCAGC
GTGCGCGAAC TCGTGCGGCG TGTCGGAAGC CTGTGCGGCC GCAGCGCCAA CGTGCATGCG
TTGCCGGCTT CGCTGGCGCT TGCGATCGGA GCGGCGTCCG AATGGTTCGA AGGCCAGGTG
ATCCAGCGCA CGCCGCGGGT CTCGATCGAG GCGGTGCGCA TCGCGTTGCG CTCGATCCCG
CTGGACACAC GAAAGGCGGA GACCGAACTC GGCTATCTGC CTCGCCCGAT CGACGACGCG
CTCACCGACG CCATCGCCTG GCTCACGCGC CGTGACGCGG ATGCGGCTCA GCCGCGGGTC
TCGGCTTAG
 
Protein sequence
MLQPRARMAL AGRRPILVTG GNGFIGQHLV AALRRRHGVV RVLDLQPPPP GPVPEFIQGT 
ILDPHDVRRA LDGVDTVYHL AAISHLWTAN PADFERVNQH GTELMLAAAR ERGVRNIVHC
STEAILFPYR RGGTTMPQRA EDMPGPYTRS KFMAEQIARE AAADGLRVVI ANPTVPIGPG
DHNFTEPTRM LDLFARKSPP MVLDSMLNLV DVRDVAAGLI LAGERGRAGE RYILGGENVS
VRELVRRVGS LCGRSANVHA LPASLALAIG AASEWFEGQV IQRTPRVSIE AVRIALRSIP
LDTRKAETEL GYLPRPIDDA LTDAIAWLTR RDADAAQPRV SA