Gene Nwi_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0894 
Symbol 
ID3674338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp972786 
End bp973283 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content61% 
IMG OID637712445 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_317510 
Protein GI75675089 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.588251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTGGG ATCTGCAAAA GCTGTTCATT CGGCACGCGC GGGAGATTGA TCGCTTTCTC 
CGCCGCCGCG GCCACAATGC CGAGACGGCT GCCGATATTA CCCAGGATAC GTTCCTGCGC
GTGCTGGCCT CGCCGCCGGG CGAGGCTCGG ACCAACCACA ATCCGAAAGC CTATCTCTAT
CAGGTGTCGC GCAGCCTCAG CATCAATCAC CTGCGCCGCG AAAGCCTGAT ACAGACGACT
GATCTTGATG AGGCGGGCGC TATCGCCGAT CCAACGCCGT CAGCCGAGAA GATCATCTAC
TCACGGCAAT GTCTGGCGCA GACGCGCAAA GCCCTCGCCG AATTGCCGGA ACGCACCCGG
ATGGCCTTTG AGATGCACCG GCTCTGCGAC AAGACCATCC AGGAAGTGGC CGACGAGCTG
GGCGTCTCGA CCAGCCGGGC CTGGAAGCTG ATCCGGAATG GCTATCGGCA TCTCCTGACG
CGGGTGGACG ATTTCTGA
 
Protein sequence
MTWDLQKLFI RHAREIDRFL RRRGHNAETA ADITQDTFLR VLASPPGEAR TNHNPKAYLY 
QVSRSLSINH LRRESLIQTT DLDEAGAIAD PTPSAEKIIY SRQCLAQTRK ALAELPERTR
MAFEMHRLCD KTIQEVADEL GVSTSRAWKL IRNGYRHLLT RVDDF