Gene Nwi_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0889 
Symbol 
ID3674333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp967844 
End bp969508 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content61% 
IMG OID637712440 
Producthypothetical protein 
Protein accessionYP_317505 
Protein GI75675084 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases
[COG3453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01244] conserved hypothetical protein TIGR01244 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA AGAAACTATC CGATGAACTG AGCGTGTCGG CACAGGTCAT GCCGCAGGAT 
ATGGCCGCGT TGAAGCAGTC TGGTTTCCGT TCGATCATCT GCAACCGGCC TGACGGCGAG
GCCGCCGATC AGCCGTCGGC TCGGGAACTG GAATTGGCAG CGTCCAGCCA TGGACTCGAA
TTCGTCCATC AGCCGGTCGT TGCCGGCAAG ATGTCGGATG ATGACGCCGT GCAATTCGCC
CAGACACTAA AGAGCCTGCC GAAGCCGACC CTGGCATTCT GCCGTACAGG AACACGCTCC
ATTTCGCTTT GGTGTTTGGC GAATGCATCC ACGCAACCCC TCCCCGCGCT GCTCGGCGCC
GCCAAGGCAG CCGGCTACGA TATGTCCGGG ATCGTGCGGA GGATCGCCAA CGGCGGCAGG
ACTCCGACAC GCCTGCCCGA CGCAAGCTAC GACGTCGTCA TTGTCGGCGG CGGCGCCGCC
GGCATCGCCT GCGCGTCAAG TCTCCTGGCG CGCGCGCCCG ATCTCGACAT CGCCGTTATC
GATCCCGCCG ACATTCACTA CTACCAGCCC GGATGGACCA TGGTCGGCGC CGGCATTTTC
GACGCAACGT CAACCGTCCA TACGATGGCG TCGGTCGTTC CCTCCGGCGT CACCTGGATC
AAAGCCGCGG TTACCGCATT CGAGCCGGCC GAGAACGCCG TCATTCTGGA AGGATGTCGC
GTCGTAAAGT ATAGCCGTCT CGTCGTCTGC CCCGGCCTGA AACTCGATTG GGAAAAGGTC
GATGGGTTGA CCGAAACGTT GGGCCGCAAC GGCGTGACCT CCAACTATCG CTTCGATCTT
GCGCCCTATA CCTGGAAACT CGTCCGTTCC CTGAAATCCG GAAACGCGGT CTTCACGCAG
CCGCCGATGC CGATCAAGTG CGCGGGCGCA CCGCAAAAGG CGATGTATCT GTCGGCCGAT
CATTGGCATC GCCAGGGTCA TCTCCGCGGC ATCGATGTCG GATTCTATAA CGCGGGTGGC
GTGCTGTTCG GCGTGGCCGA CTACGTTCCG GCCTTGATGG AATACGTCAG AAAATATGAT
GCGAAGCTGA AGTTTCAGCA TGACCTCGTC GCTATCGATG GTCCGGATAA AAAAGCCTAC
TTCACCAAGA CCTCGGCCGA TGGTCCGGCG GAGACCGTCG AAGTGCAGTT CGACATGATC
CATGTAACGC CGCCTCAATG CGCGCCGGAC TTCATCCGCG TGAGCCCATT GGCTAACGCG
GCTGGATGGG TCGATGTGGA CGACGGCACC CTGCGCCACA AGGCGTATGC CAATATCTGG
TCTCTCGGCG ATGTCTGTTC CGCCCCGAAC GCAAAGACGG CCGCGGCGGC CCGCAAGCAG
GCGCCGATCG TTGCCGAGAA TATCTGCGTC GATCTGGGTC TGAGAGCAAA GCAGGCCGTG
TATGACGGTT ATGGAGCGTG CCCGCTAACC GTCGAGCGCG GCAGAATTGT TCTGGCCGAA
TTCGGATATG GCGGAAAGCT TCTGCCGAGC TTCCCTACCT TCATCCTGGA CGGCAGGAAA
CCAACCCGGG CCGCCTGGTG GCTGAAGGAG CGAGTCCTGC CGCCGATCTA TTGGCATGCG
ATGCTCAAGG GTAAAGAGTG GATGGCCGCT CCAGATGTGC GCTGA
 
Protein sequence
MDTKKLSDEL SVSAQVMPQD MAALKQSGFR SIICNRPDGE AADQPSAREL ELAASSHGLE 
FVHQPVVAGK MSDDDAVQFA QTLKSLPKPT LAFCRTGTRS ISLWCLANAS TQPLPALLGA
AKAAGYDMSG IVRRIANGGR TPTRLPDASY DVVIVGGGAA GIACASSLLA RAPDLDIAVI
DPADIHYYQP GWTMVGAGIF DATSTVHTMA SVVPSGVTWI KAAVTAFEPA ENAVILEGCR
VVKYSRLVVC PGLKLDWEKV DGLTETLGRN GVTSNYRFDL APYTWKLVRS LKSGNAVFTQ
PPMPIKCAGA PQKAMYLSAD HWHRQGHLRG IDVGFYNAGG VLFGVADYVP ALMEYVRKYD
AKLKFQHDLV AIDGPDKKAY FTKTSADGPA ETVEVQFDMI HVTPPQCAPD FIRVSPLANA
AGWVDVDDGT LRHKAYANIW SLGDVCSAPN AKTAAAARKQ APIVAENICV DLGLRAKQAV
YDGYGACPLT VERGRIVLAE FGYGGKLLPS FPTFILDGRK PTRAAWWLKE RVLPPIYWHA
MLKGKEWMAA PDVR