Gene Nwi_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0883 
Symbol 
ID3674327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp959684 
End bp960568 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID637712434 
Productdihydrodipicolinate synthetase 
Protein accessionYP_317499 
Protein GI75675078 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATC TCGCTATTCA AGGCATCATT GGTTACACGA TCACGCCCTT CGACAACCAA 
GGCCGCCTTG ACTTGAACGC GCTGGATCTG ACTATCAACC GCATGATCGA GGCTGGCGTT
CACGCCATCG CGCCCCTCGG CAGCACAGGC GAAGGCGCCT ATTTGAGTGA GGAAGAGTGG
ACCGCCGTCG CCGAACGCAG CGTGAAGACC ATCGCCGGCC GCGTCCCGGT GATCGTCAGC
GTCTCCGATC TAACGACGGC TGGCGCGGTG AGGCGCGCGC GAGCGGCGGA GTCGTTCGGC
GCCACTGCGG TCATGGTCCT GCCGACATCG TACTGGAAGC TGCAGGAAGA CGAGATCGTC
GCGCATTATC AGGCGGTAGG AACGGCCATT GGCGTGCCGG TGATGCTCTA CAACAACCAT
GCGGTCAGCG GGATCGACAT GTCGGTTGAT CTGATCCTGC GCATCGTGGA CGCCGTCGAC
AATGTCACGA TGGTCAAGGA AAGCACCGGC GACATCCAGC GGATGCATCA ACTCTATCTG
CGGACCGAAG GACAGCTTCC GTTCTACAAC GGCTCCAATC CCTTGGCTCT CGAAGCCTTC
GCCGCTGGTG CGACCGGCTG GTGCACGGCC GCCGCCAATC TGATCGCCGC CGACAACATA
GCGCTCTACG AAGCAGCTCG GCAGGGTCGC CTCGTCGAGG CCCGAGCGTC CTTCTACCGG
CAGTTGCCGT TGCTCGACTT CATTCTCAAG GGCGGTTTGC CCAAGACGAT CAAGGCCGGG
CTCGAAATAG CCGGGGTGCC GGTCGGAGCA CCGCGGTTGC CGGTGAAGCC TCTGGACGAG
GCGGGCAGAG CGAGGCTCTC GGCCATTCTC GAGACGCTGA ACTGA
 
Protein sequence
MPDLAIQGII GYTITPFDNQ GRLDLNALDL TINRMIEAGV HAIAPLGSTG EGAYLSEEEW 
TAVAERSVKT IAGRVPVIVS VSDLTTAGAV RRARAAESFG ATAVMVLPTS YWKLQEDEIV
AHYQAVGTAI GVPVMLYNNH AVSGIDMSVD LILRIVDAVD NVTMVKESTG DIQRMHQLYL
RTEGQLPFYN GSNPLALEAF AAGATGWCTA AANLIAADNI ALYEAARQGR LVEARASFYR
QLPLLDFILK GGLPKTIKAG LEIAGVPVGA PRLPVKPLDE AGRARLSAIL ETLN