Gene Nwi_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0874 
Symbol 
ID3674318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp944812 
End bp949281 
Gene Length4470 bp 
Protein Length1489 aa 
Translation table11 
GC content67% 
IMG OID637712425 
Producthypothetical protein 
Protein accessionYP_317490 
Protein GI75675069 
COG category[S] Function unknown 
COG ID[COG2911] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC GGCGGACCAT CATGCTCGCC GCTGCCGCAG CGCTCGGGCT CGCCGGCGTC 
ACGGCGGCGG GCGTCGTTGC CTACAAGATG ATCGGAGGGA TCGGCGACAA TCAGCAGGAC
CTTCTCGCCG GCCTTGTGTC GCGGACGCTC TCCACGCCGG CAACCCAGGT GCATATCGGG
GCCGTGGATG GCGCGTTATC ATCCGACGCC ACGATCCGCG ACGTGACCAT CACCGACAAG
GAAGGCACCT GGCTGAAGCT CGATCGCGCC CGCCTCGTCT GGCGGCGTAC CGCGCTGCTG
CTGGGACGAC TGGAGATCGA CCGCCTCGAG ATCGGCACGC TCGAGATCCG TCGGAAGCCG
CTAGCCGCGG ACCAGCCCGT CGCAGAGCCC GAGCAGCCTG CCGTGGAGAC CGGCCAGCCC
GACACCGAAC CGAGCGCACC GGCTGCACAG CCGGGGCCAT CCGCAGCGGA GTCCAGCCAG
TCGATCCTGC CCGATCTTCC GGTGAAGGTG CAGGTGAAGG CGTTCGATCT TCACGCGCTG
GTGCTCGGTG AGCCGGTTCT CGGCAAGGCC GTAAGCGTCG CGGCGACCGG AAACACCGAA
CTGGGCTCGC CCTCGGAGGG GCTCGTCTTC AATCTCGACG CGACCCGCAA GGATTCCCCT
GGCCGTTTCA AGGTGGAGCT TGCCTTCGTA CCGAAGAGCA ACGCCCTCAC CCTCGACGTT
TCTCTCGACG AGCCATCCCA CGGACTATTA TCCAAGCTCG GCCGGTTTCC CGACGAACCG
CCGATCGCCT TCGCGCTTCG CGGCAAGGGT ACGCTCGACA GCTTTCGCGG CGCGTTGAAA
TTCCAGGCCG GCCCCACCAT CGATGCGACC GGCGCCATCA TGCTCGACCG GAGCGGGACC
GGCCGGGTTC TCGCGACCCG GATCAACGGT CATCTCGGAC CATGGCTGCC GCCGCTTGCC
GCCTCCGTCT TTGCCGGCGA AACCAGACTC GATAGCGCGA CGCGCATCGG TGACGACGGC
AGCGTGGCCA TGGACGGGTT GACGCTCACC AGCCGTCTCG CCCGGCTCGA GGTGAAGGGC
GCGCTCGGCG CCGACAAGAT GATGGATTTC TCGGCGACCG TTCGCTCGCT GCCGAGCAAC
GGTGACGTCA CCGAAACCGA CCAGGGCTCG ATCCGCAGCC TCACCTTCGA CGGCCGCGTC
AACGGCCTGG CGAAAGCGCC CCGCGTTTCA GCAAAGCTCG CGGTGTCCGA TGCCCGTTTA
CCCGACGGCA ACCTTGACGC GCTCGAAGCC TCGATCAACG TCATTCCAGA CGCTGAACTC
AACGACCTCG CCACGACCGT CGCGATCGAC GCCAGCCTTC GCGCGTCCGG CATCGCGCTG
CGAGACCCTG CTCTCGCGGC AGCAATCGGC GACAGCGCAT CCCTCGTGCT CAAGGGCAGC
ACGAATCTCG GTGGCCAAGC AAAGATAGAG CGCCTGGAAG CCGGCACCTC CACCATTCAG
GCTGCCTATA CGGGTGAAGC CAGCCGGGAC CGGCTGCGCG GTCATGCGAC CGGCGCCGTG
CCCGATCTCG GCCGCTTCGG CGGCCTTGCC GGATTACAGC TTGCGGGCGC GGTGAGGCTG
GGCCTCGATC TCGACGGCGA CCTTCGACGC GGCCGCATCG ACGCAAAGCT CTCCGGCACC
GGCGACCGCT TCGCCACCGG CCTTCCGGCG CTTGATGGAC TTGCGGGACC ACGCGTCACC
CTCGCCGCCG ATTTTTCGTC CGGCGGCAAC GATACATACA CGGTCCGCGC GGCTTCGCTG
GACGCCGCCC ATGTCACGGT TCGCGCCAAG GGAAGCCTGA CCCGCGACGC AAGCGACCTC
GCGGCGCGTA TCGAGCTTCC GAATCTCGCG GCGACCGATG CGCGCCTGGC CGGCGTGGCG
TCGCTCGACG CGCGGCTGAC TGGAGGACTC GCGCATCCCG GACTATCGCT CACGGCGGCG
CTGGATCACG TGACGACGAT GCAGCGCCCG ATCCCGCATC TGGGACTGAA CGTCACGGTC
GCCGACATCA ACGGACCCTG CGCCATCGAC GTCAGACTCG ACGGCGCCAT TGACGGCAAG
CCTGCGCGCG GCATCGTTCA GGCGAGCCGC CGTCCGATGG AGCACGCCCC CAACACCAAG
ATCGATCAGG ATGCGCGCAA CAAGCCCGCG CCTGCCTTCG CGGGCTGGGA CGCCAGGACC
ATCGACATCA CTATCGGGTC GGTGTCGCTG AAGGGCGCGG GCACGATCGA CGCGCAAAAC
CTCGCGCGCG GACAGCTTCG CTTCGCGGCC GACTCGCTGG CGGACATCGC ACCGCTCGCC
CTCATCGATC TTGCAGGCGC GGCTTCACTC GACCTTGCGC TGTCCGACGA CGGCGGGCGG
CAGTCCGTCC GCCTTGTCAG CAAGGGCACG GGGCTTCGGG CCGCCACCAC GAAGATCCGG
AACTTCGATC TGCGTGCCGA GGGCGACGAT CTCTACAGCC GTCCGGTGCT CAACGCGGAT
GTCCGGATCA ACGGCGCCGA GATCGGCGGC CAGGCGATCG CGAACGCAAC CCTGAGCGCG
AAAGGCAACG CCGACGCGAG CACAATCGGC TTGTCGGCCA AAGCCGCCGG CTTCAATCTC
GATGCCGCGG GCGTGTTGAC GCCGAAGGAG CGCATCCGGT TCGACCTCAA CCGCTTTACC
GCGAAACGCG GTGCCAGGAC GATCGCCCTG CAGAGGCCCG CGAGCTTCAC GCTCGACGAC
GGCACGGTGA TGATCCGACA TCTGGCGATC GGGATCGGCG GCGGTCGCTT CACGCTCGAT
GGCACTGCCG GCAAGGCACT CGACCTCAAG GCCGTGGCAA GCGCAGTCCC GCTCGCCGAA
GCCGATGTCG CGATACCTGG CCTCGGTCTC GGCGGCACGC TCGATGCGTC GGCCGAAATC
GGCGGTTCCG CAAGCTCGCC GACAGGACAA TACAAGATTT CCGTCAAACG GCTCACGGCG
CCGCAAGCAA GAAACGCCGG CGTACCGCCG ATCGATATCA CTCTGGACGG CCGTCTCGAA
AAGACCCGCA CGAAGCTCAA CGCCACGGCC TCGGCAGGCA AGGCCGGCAC CTTCACGGCG
GCCGGCACCG TGCCGTTCGA CGCCTCCGAA ACGATCGCAA TGACGGCTAA AGGCCGGCTT
GACGCCGCCG TCGCCAACGC CATGCTGTCG GCTTCCGGCC GCACCGTTTC CGGAATCGTG
CAGCTTGATG CCCGCGTGAG CGGCACGCGC GCCAAGCCTC AGGTCGGCGG CTTTGCCGCC
ATGAGCGGCG GCAGCTTCCG CGATAGCCAG GTGGGAATGC GGCTCGACGC CATCGAGGCA
AAGGTCACCG CTGAAGGTGA GCGCATATCC ATAGAGCGGC TGAGCGCGAC GACCCCCAAC
GGCGGCGCGC TGTCCGGTTC CGGCCAGATT CGCATCGCGC CCGATGCGGG CTTTCCCGGC
ACGGTCTCGA TCCGCGGGAA ACAGGCGACG CTCGCGGCGA GCGCGCTCGC GACCGCTCGG
GCGAATCTTG ACGTCAACGT CACCGGCGCG CTTGCGCGCG ATCCGAAGAT AAGCGGCCGC
GTCGATCTCA CTCATGTCAG CGTCGATATT CCAGAACGGC TGCCCTCGAC GCTGAAGCCG
ATCGACGGCA TCGACCACGT CAACGCCACG GGCCAGGCCG CCGTCCGGCT CGCGGCGGCG
CGCAAGGCGG AAGCCGCGGA GAAGAGCAAC GGCAAGGCAC GCCAGGCGCT TTTCAACGCC
GCGCTCGACA TTACCGTCTC GGCACCGAAC CACGTTTTCG TGCACGGCCG TGGCGTGAAC
GCGGAACTTG GCGGCTCCCT TCGCGTCGGC GGCACGACCA ACAAACCCGT CACCAAGGGC
GCATTCTCGC TTTATCGCGG CAAGATGACG GCACTGGGAA AGACGCTGAA CTTCACCAAG
GGAAATCTCT CCTTCAACGG GGACCTTGCG CCTGAACTCG ATTTCGCGGC CGAGATAGAA
GCCTCCGATA TCACCGCACA GATCGGGATT TCGGGCCCGG CGGCCGCACC TGTTTTTGCC
TTCACGTCGC GACCCGAACT GCCCCAGGAT GAAATCCTGT CACGCATCCT GTTCCAGAAG
GCGTCGGGTA ACCTGACGAC GGCGCAAGCC CTGCAACTCG CACAAGTGGC GGCGCAGTTC
GCAGGCGGCG GCGATGGGGT GCTGGACCGC ATGCGCCGTT CGCTCGGCGT CGACAGTCTG
GATGTGAGCG TCGGATCGGG GGGCGGCCCA ATGGTGGGCG CATCACGCGC GATCGGCGAC
AGGCTGAGCG TCGGTGTCCG GACCGGGGCA ACCCCCAGCC AGTCCGGCCT CTCGGCCAAT
GTGGACGTGA CGCGCCATAT CCGGGTGGAA TCCGATGTCG ATGCGAGGGG CGCGACATCG
ATGGGAGTCG GCATGAAGTT CGAATGGTGA
 
Protein sequence
MRARRTIMLA AAAALGLAGV TAAGVVAYKM IGGIGDNQQD LLAGLVSRTL STPATQVHIG 
AVDGALSSDA TIRDVTITDK EGTWLKLDRA RLVWRRTALL LGRLEIDRLE IGTLEIRRKP
LAADQPVAEP EQPAVETGQP DTEPSAPAAQ PGPSAAESSQ SILPDLPVKV QVKAFDLHAL
VLGEPVLGKA VSVAATGNTE LGSPSEGLVF NLDATRKDSP GRFKVELAFV PKSNALTLDV
SLDEPSHGLL SKLGRFPDEP PIAFALRGKG TLDSFRGALK FQAGPTIDAT GAIMLDRSGT
GRVLATRING HLGPWLPPLA ASVFAGETRL DSATRIGDDG SVAMDGLTLT SRLARLEVKG
ALGADKMMDF SATVRSLPSN GDVTETDQGS IRSLTFDGRV NGLAKAPRVS AKLAVSDARL
PDGNLDALEA SINVIPDAEL NDLATTVAID ASLRASGIAL RDPALAAAIG DSASLVLKGS
TNLGGQAKIE RLEAGTSTIQ AAYTGEASRD RLRGHATGAV PDLGRFGGLA GLQLAGAVRL
GLDLDGDLRR GRIDAKLSGT GDRFATGLPA LDGLAGPRVT LAADFSSGGN DTYTVRAASL
DAAHVTVRAK GSLTRDASDL AARIELPNLA ATDARLAGVA SLDARLTGGL AHPGLSLTAA
LDHVTTMQRP IPHLGLNVTV ADINGPCAID VRLDGAIDGK PARGIVQASR RPMEHAPNTK
IDQDARNKPA PAFAGWDART IDITIGSVSL KGAGTIDAQN LARGQLRFAA DSLADIAPLA
LIDLAGAASL DLALSDDGGR QSVRLVSKGT GLRAATTKIR NFDLRAEGDD LYSRPVLNAD
VRINGAEIGG QAIANATLSA KGNADASTIG LSAKAAGFNL DAAGVLTPKE RIRFDLNRFT
AKRGARTIAL QRPASFTLDD GTVMIRHLAI GIGGGRFTLD GTAGKALDLK AVASAVPLAE
ADVAIPGLGL GGTLDASAEI GGSASSPTGQ YKISVKRLTA PQARNAGVPP IDITLDGRLE
KTRTKLNATA SAGKAGTFTA AGTVPFDASE TIAMTAKGRL DAAVANAMLS ASGRTVSGIV
QLDARVSGTR AKPQVGGFAA MSGGSFRDSQ VGMRLDAIEA KVTAEGERIS IERLSATTPN
GGALSGSGQI RIAPDAGFPG TVSIRGKQAT LAASALATAR ANLDVNVTGA LARDPKISGR
VDLTHVSVDI PERLPSTLKP IDGIDHVNAT GQAAVRLAAA RKAEAAEKSN GKARQALFNA
ALDITVSAPN HVFVHGRGVN AELGGSLRVG GTTNKPVTKG AFSLYRGKMT ALGKTLNFTK
GNLSFNGDLA PELDFAAEIE ASDITAQIGI SGPAAAPVFA FTSRPELPQD EILSRILFQK
ASGNLTTAQA LQLAQVAAQF AGGGDGVLDR MRRSLGVDSL DVSVGSGGGP MVGASRAIGD
RLSVGVRTGA TPSQSGLSAN VDVTRHIRVE SDVDARGATS MGVGMKFEW