Gene Nwi_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0870 
Symbol 
ID3674314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp941240 
End bp942301 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content60% 
IMG OID637712421 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_317486 
Protein GI75675065 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.465972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTATC CTGCGTCCGA GAAAGCCGAG ATCATCGCGT TGGTGGAGCA GTCGCATTTG 
CCGGCCAAAC GCACGCTGGA CAAGCTCGGC ATCCCCCGCG CCACGTTTTA TAGATGGTAC
GATCGCTACC GCGCGGGCGG CATTGAGGCC CTGGCAGATC ACCGCTCTCG ACCGGATCGG
GTCTGGAATC GTATCCCGGA TGACGTCCGC GGCCAGATCA TCGACCTGGC ATTGGAGCTT
CCGGAACTAT CGCCGCGAGA GCTCGCCGTG CGGTTTACCG ACGAGAGAAA GTACTTTGTC
TCGGAGGCTT CGGTCTATCG GCTGCTGAAG GCGCACGACC TCATCACCAG TCCGGCCTAT
GTAGTGATCA AGGCGGCGAA CGAGTTCAAG GACAAGACCA CCGCCGCCAA CCAGCTCTGG
CAGACCGACT TCACCTACCT GAAGATCACC GGCTGGGGCT GGTACTATCT ATCGACGGTG
CTCGACGACT TCTCGCGCTA CATCGTCGCC TGGAGGTTAG GTCCCACGAT GTGTGCCTCC
GACGTCACGG CTACGCTCGA TCAGGCACTG GCCGCCTCTG GTCTGGATCA CGTCAGCGTC
AGGCAGCGGC CCCGGCTTCT CAGCGACAAT GGTTCGAGTT ACGTCGCGGA TGATCTGGCC
ACGTGGCTCA GGGCCAAGGA CATGCAGCAT GTGCGCGGAG CGCCGTATCA TCCTCAGACT
CAGGGCAAGA TCGAGCGTTG GCATCAAACG TTGAAGAACC GCATCCTGCT TGAGAACTAC
TATTTACCGG ACGACCTCAA ACGTCAGGTC GCCGCGTTCG TCGAACACTA TAATCATGAC
CGCTACCACG AGAGCATCGG CAACGTTACA CCTGCCGACG TCTACTTCTG TCCGCCGTCA
GGGCTCTTGA GACAGTTTAG GGGTTTTCGG GAAGGGAGGA TTTCTGGATC ATCGCAGCCA
ATTTGGAGCG CAGATGAGAC AGAAATCCGG GCCGGAGAAA GCACCGGCAG AGCAGGTCGT
GAAGGACATC CGCCGGGCAA CGCGCCGGCA GTTCTCGGCT GA
 
Protein sequence
MRYPASEKAE IIALVEQSHL PAKRTLDKLG IPRATFYRWY DRYRAGGIEA LADHRSRPDR 
VWNRIPDDVR GQIIDLALEL PELSPRELAV RFTDERKYFV SEASVYRLLK AHDLITSPAY
VVIKAANEFK DKTTAANQLW QTDFTYLKIT GWGWYYLSTV LDDFSRYIVA WRLGPTMCAS
DVTATLDQAL AASGLDHVSV RQRPRLLSDN GSSYVADDLA TWLRAKDMQH VRGAPYHPQT
QGKIERWHQT LKNRILLENY YLPDDLKRQV AAFVEHYNHD RYHESIGNVT PADVYFCPPS
GLLRQFRGFR EGRISGSSQP IWSADETEIR AGESTGRAGR EGHPPGNAPA VLG