Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0858 |
Symbol | |
ID | 3677200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 932247 |
End bp | 932909 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637712409 |
Product | TENA/THI-4 protein |
Protein accession | YP_317474 |
Protein GI | 75675053 |
COG category | [K] Transcription |
COG ID | [COG0819] Putative transcription activator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.162996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGTCT TCGACCGGCT GAAGGCAGCC ACACCAGCCG ACTGGCGGAG CTACATCGAC CACGACTTCG TCCGTCAGAT GGGCGCGGGT ACGCTGCCGC AGACGGCGTT CCGCACCTAC CTCGTGCAGG ACTACCTGTT CCTGATCCAG TTCGCGCGTG TCTATGCGCT CGCGACCTAC AAGAGCCGCA CGCTCGCCGA CATGAAGGCG GCACAAGCCG GGCTGGCCGC CATCTTCGAC GAAATGGATC TTCATGTGCG GCTTTGCGAC CGCTGGGGGT TGTCGCCGGA GGACATCGAA GCCGCGCCCG AGCATCAGGC GACGATCGCC TATACCCGCT TCGTGCTGGA TTGCGGCGCG GCAGGCGACC TGCTCGACCT GCATGTCGCG CTCGCCCCTT GCGTCATCGG TTATGCCGAG ATCGGGCGCA ACCTGGCGCC GAATGGAATC GACGCGCTCG GCGACCATCC CTATCGCGAA TGGATCGCCG AATATGCGGG CGATGCCTAT CAGGCTGTTG CGGCCAACGC GCGACATCAT CTCGACGATC TTGCAGCACG GGCCATGACA GAGCGGCGCT TCGACGAACT CGCGACGTTA TTCGGCAAGG CGTCCCGCCT GGAAGCCGAC TTCTGGCAGA TGGGGCTGGA TGCTAATCGC TGA
|
Protein sequence | MDVFDRLKAA TPADWRSYID HDFVRQMGAG TLPQTAFRTY LVQDYLFLIQ FARVYALATY KSRTLADMKA AQAGLAAIFD EMDLHVRLCD RWGLSPEDIE AAPEHQATIA YTRFVLDCGA AGDLLDLHVA LAPCVIGYAE IGRNLAPNGI DALGDHPYRE WIAEYAGDAY QAVAANARHH LDDLAARAMT ERRFDELATL FGKASRLEAD FWQMGLDANR
|
| |