Gene Nwi_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0858 
Symbol 
ID3677200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp932247 
End bp932909 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content64% 
IMG OID637712409 
ProductTENA/THI-4 protein 
Protein accessionYP_317474 
Protein GI75675053 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.162996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCT TCGACCGGCT GAAGGCAGCC ACACCAGCCG ACTGGCGGAG CTACATCGAC 
CACGACTTCG TCCGTCAGAT GGGCGCGGGT ACGCTGCCGC AGACGGCGTT CCGCACCTAC
CTCGTGCAGG ACTACCTGTT CCTGATCCAG TTCGCGCGTG TCTATGCGCT CGCGACCTAC
AAGAGCCGCA CGCTCGCCGA CATGAAGGCG GCACAAGCCG GGCTGGCCGC CATCTTCGAC
GAAATGGATC TTCATGTGCG GCTTTGCGAC CGCTGGGGGT TGTCGCCGGA GGACATCGAA
GCCGCGCCCG AGCATCAGGC GACGATCGCC TATACCCGCT TCGTGCTGGA TTGCGGCGCG
GCAGGCGACC TGCTCGACCT GCATGTCGCG CTCGCCCCTT GCGTCATCGG TTATGCCGAG
ATCGGGCGCA ACCTGGCGCC GAATGGAATC GACGCGCTCG GCGACCATCC CTATCGCGAA
TGGATCGCCG AATATGCGGG CGATGCCTAT CAGGCTGTTG CGGCCAACGC GCGACATCAT
CTCGACGATC TTGCAGCACG GGCCATGACA GAGCGGCGCT TCGACGAACT CGCGACGTTA
TTCGGCAAGG CGTCCCGCCT GGAAGCCGAC TTCTGGCAGA TGGGGCTGGA TGCTAATCGC
TGA
 
Protein sequence
MDVFDRLKAA TPADWRSYID HDFVRQMGAG TLPQTAFRTY LVQDYLFLIQ FARVYALATY 
KSRTLADMKA AQAGLAAIFD EMDLHVRLCD RWGLSPEDIE AAPEHQATIA YTRFVLDCGA
AGDLLDLHVA LAPCVIGYAE IGRNLAPNGI DALGDHPYRE WIAEYAGDAY QAVAANARHH
LDDLAARAMT ERRFDELATL FGKASRLEAD FWQMGLDANR