| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0849 |
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| Symbol | |
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| ID | 3676290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 925734 |
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| End bp | 926294 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637712400 |
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| Product | conjugal transfer protein precursor |
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| Protein accession | YP_317465 |
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| Protein GI | 75675044 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0246134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCGC GCCGCAGGAC GCTGCTCGCA ATGCTCACGG GTGCGGCGCT GATCGTCGCG
CCGGCCTGGA GCCGCCCCGA ACTCCGCTTC ATCTGGAACG CATCCGCCAG CGTGCCGATC
GGTCTCTATC GCATCGTGCC CGGCAATCAT GTCGACGTCA CCGATCTCGC CGTCGTCATG
CCGCCCGCCG AGCTGGCGGC ATTCCTCGAC GAGCGCGGCT ACCTGCCGCG CGGCCTGCCG
CTCATCAAGC GCGTGCTGGC GCTCGGCGGT ACGAGAATCT GCCGGCGCGA CAGCGCCATT
ATCGCCTATG ACGGAATCTA CGGGCAGGCG CTCGCGCGCG ATACGCGCGG CCGACCGCTG
CCCGACTGGC AAGGCTGCCG CACGCTCCAT GACGGCGAAG CCTTCTTCAT GAATTGGGAC
AGTCCCGACA GCTTCGACAG CCGCTATTTC GGGCCGCTTC CGATCAGCAC CATCGTCGGT
CGCGCCATTC CCATCTGGAC CACCGACGGC ACCGATCCGG CCGCGGAATC CCTCCGCGCG
CCGGTCTCCG ACGAGCCGTG A
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| Protein sequence | MTARRRTLLA MLTGAALIVA PAWSRPELRF IWNASASVPI GLYRIVPGNH VDVTDLAVVM
PPAELAAFLD ERGYLPRGLP LIKRVLALGG TRICRRDSAI IAYDGIYGQA LARDTRGRPL
PDWQGCRTLH DGEAFFMNWD SPDSFDSRYF GPLPISTIVG RAIPIWTTDG TDPAAESLRA
PVSDEP
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