Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0838 |
Symbol | |
ID | 3676279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 918447 |
End bp | 919307 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637712389 |
Product | integrase, catalytic region |
Protein accession | YP_317454 |
Protein GI | 75675033 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.204021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00436144 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCGACC TTCCGACGGG ACCGAAAGAT CCGCGCTCGA CGGTGCTCTC ATCCGAGGAG GAGGCGATCA TCGTCGCCTT CCGCAAGCAT ACCCTGTTGC CGCTCGATGA TTGCCTCTAC GCGCTTCAGC CAACGATCCC GCACCTGTCG CGGTCTTCAT TGCATCGCTG CCTGCACCGT CACGGCATCA GCCGGCTCCC GGAGGTCGAA GGCGACAAGC CGATCAGGAA GACGTTCAGG AGCTACCCGA TCGGCTACTT CCACATCGAC ATCGCCGAGG TGCAGACGGC TGAGGGCAAG CTGCGCCTGT TCGTGGCCAT CGACCGCACT TCGAAGTTCG CCTACGCCGA GCTCCACCAA GAGGCGGGCA AGATGGTCGC GGCTCAGTTC CTGCGCAACC TCATCGTGGC AGTTCCCTAT GCCATCCACA CGGTGCTGAC GGACAACGGC ATCCAGTTCA CCAACCACGC CCGTCACAAA TATGCGTTCC ACCACATCTT CGATCGCGTC TGCGACGAGA ACGGCATCGA GCACAGGCTC ACCAGGATCA ACCATCCCTG GACCAACGGA CAGGTGGAAC GGATGAACCG CACCATCAAG GACGCCACCG TCAAGCGCTT CCACTACGAC AATCATGACC AACTGCGCCG GCACCTTCAG GACTTCATCA AGGCATACAA CTTCGGCCGA AGGCTGAAGA CGCTCAAAGC GCCTCACACC CTACGAGTTC ATCTGCAAAC GATGGACTTC AGAGCCCGAT CGATTCATCA TCGATCCAAT CCATCAAATG CCGGGACTGA ACACCATGCC GCCTTTGGAG CGGCCGATGG CCTGGCTCTG AGTCCCCCTT TTGCGCCCTG A
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Protein sequence | MADLPTGPKD PRSTVLSSEE EAIIVAFRKH TLLPLDDCLY ALQPTIPHLS RSSLHRCLHR HGISRLPEVE GDKPIRKTFR SYPIGYFHID IAEVQTAEGK LRLFVAIDRT SKFAYAELHQ EAGKMVAAQF LRNLIVAVPY AIHTVLTDNG IQFTNHARHK YAFHHIFDRV CDENGIEHRL TRINHPWTNG QVERMNRTIK DATVKRFHYD NHDQLRRHLQ DFIKAYNFGR RLKTLKAPHT LRVHLQTMDF RARSIHHRSN PSNAGTEHHA AFGAADGLAL SPPFAP
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