Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0834 |
Symbol | |
ID | 3676275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 915690 |
End bp | 916523 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637712386 |
Product | recombinase |
Protein accession | YP_317451 |
Protein GI | 75675030 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.315619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000339857 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGATCGCGG ACGGCCTCAA GCGTCGCTTT GATCTCGTTC TGACGGAATC GCTTGACCGG CTGTCGCGCG ACCAAGAGGA CATTGCCGGC TTCTACAAGC GAATGCGGTT CGTCGGCATC AACATCGTCA CTTTGTCGGA AGGCGAAGTG AGCGAGCTGC ACATTGGTCT CAAGGGAACG ATGGGCGCGC TGTACCTCAA GGACCTGGCT GACAAAACGC GGCGCGGACT TCGCGGGCGT GTCGAAGACG GCAAGTCAGG TGGTGGGCTG TACTACGGCT ATGATGTCGT CAAGCAATTC GACGCGAACG GCGAAGCGAT CCGCGGTGAT CGCACGATCA ATCAGGCTGA GGCCGACGTT GTCCGCCGTA TCTTCGCGGA TTATCTGGCT GGTCAGTCAT CGCGCACGAT CGCGATGACG CTGAACCGGG AGGGTGTGTC CGGGCCGCAG GGAAGCGAAT GGGGGCCGTC AACGATTCAC GGCAATCCGA AACGCGGCGT GGGCATCCTC AACAATGAAC TTTATGTCGG CAAGTTGGTC TGGAACCGGC TGCGCTACAT CAAGGACCCT GACACAGGTA AGCGCGTTTC GCGGCTTAAC CCGGAGGGCG AGTGGGTCAT ACAGGACGTC CCCGAACTGC GCGTTGCCCG AATATGGCGG AGGTCTATCA CCAAAAGATC GCCGCCCTAT ACCGGGACCT ACAGAGCGAG GAAACCAAGA CCCAGGCTGC GGAGACCTTC CGGTCTCTGG TCAGCCGGGT GGACCTCGTT CCGGAAGGCG GAACGCTGGC AATCCTCCTG CGCGGCGACC TGGCGGCGAT CCTCCGGTTT GTAG
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Protein sequence | MIADGLKRRF DLVLTESLDR LSRDQEDIAG FYKRMRFVGI NIVTLSEGEV SELHIGLKGT MGALYLKDLA DKTRRGLRGR VEDGKSGGGL YYGYDVVKQF DANGEAIRGD RTINQAEADV VRRIFADYLA GQSSRTIAMT LNREGVSGPQ GSEWGPSTIH GNPKRGVGIL NNELYVGKLV WNRLRYIKDP DTGKRVSRLN PEGEWVIQDV PELRVARIWR RSITKRSPPY TGTYRARKPR PRLRRPSGLW SAGWTSFRKA ERWQSSCAAT WRRSSGL
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