Gene Nwi_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0808 
Symbol 
ID3676029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp893727 
End bp895262 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content65% 
IMG OID637712359 
ProductPhage portal protein, lambda 
Protein accessionYP_317425 
Protein GI75675004 
COG category[R] General function prediction only 
COG ID[COG5511] Bacteriophage capsid protein 
TIGRFAM ID[TIGR01539] phage portal protein, lambda family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.343711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0107339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGA ACTGGATCGA TCGTGCTCTC GCCAGCGTCG CACCGGGTGC GGCCCGCAAG 
CGCCTTCTCG AACGCCAGGC GTTCGAGAAG CTGGCGCGCG CCTATGATGG CGCAGCGGTC
GGACGGCGCA CTGATGGCTG GCGATCGTCG TCCAGCTCCG CCGATGGCGA GATCGCTTCC
GGCGCGTCGC GGCTGCGCGA CCGCATGCGG GATCTGACGC GCAACAATCC GCATGCTGCG
AAGGCCGTGG CGGTGCTGGT GAACAACATC GTCGGCGCCG GGATCAGGCC GCGCGCGGCG
GCCGGAACCG ACGCGCTCGA CAACCGGATC AATGAACTAT GGGAAGCCTG GGCGGCAAGA
TCAGATGCTG ATGGCCTCGC CGATTTCCAC GGACTCACCA CGCTTGCCGT CCGCGAGATG
ATCGAAGGCG GCGACGTGTT TCTGCGCCGT CGCATCCGCC GCACCGAAGA TAAGCTGCCC
GTGCCCTTGC AGCTTCAGCT TCTCGAAGCC GATCATCTCG ACGACACCAA GATCGCTGCG
CTTCCCGACG GCGGACGGAT CGTGCGCGGC ATCGAATATG ACGCCATCGG CCGACGCCGC
GCCTATTGGC TGTTTCCCGA TCATCCCGGC GACACCAGCG TGCCGCTGTC GCGCAGCCTC
ACCTCGGCGC GCGTGCCTGC AGATGGCATC GCCCACCTCT TCGAGCGCCA GCGCGTGCAG
AGCCGCGGCG TGCCCTGGGG CGCGCCGGCC ATGCGGGCGA TGCGTGATCT TGATGATTGG
ACCAACGCAG AGCTTGTCCG CAAGAAAACC GAGGCCTGCC TCGTTGGCGT GGTGCTCGGC
GCGGATGAGG CCGATCAGGG CGTGGCGCCG ACCGTCGTCG ATGCCGAAGG CAAGACCATC
GAGCAATTCG AACCCGGCCT GATCGCCTAT GCGCGCGGCG GCAAGGACAT CAAGTTCAAC
CAGCCCGCTT CAACGGCTGG CGTCTCGGAA TGGCTGCGGG CGCAGCTGCA CATCATCGCC
GCCGGATACC GCGTGCCTTA CGAGTTGCTC ACAGGCGATC TGTCTCAAGT CAACTATTCG
AGCCTACGCG GCGGTCTCGT CGAGTTCCGG CGCATGGTCG ATGCCCTGCA ATGGCAATTG
GTGATCCCGG GCTTTTGCGA ACCGGTCTGG CGCTGGTTCA CCGAGGCGGC TTGGGTTGCG
GGTTTGATCC CGAACCCCGT GGTCAAGGTC GAATGGCAAC CGCCGCGCTT TGATGCCGTC
GATCCCTTGA AGGACGCGCA GGCCGATCTT CTGATGCTGC GCTCGGGCAC CATGACTCTC
GCCCAGGCCA TCGCCCGGCA GGGTTACGAT CCGGCTTCGC AACTTGGCGA AATCGCTGAA
ATGAACTCAG CTCTCGATCG GTTGAAGATC GTGCTCGATA GCGACCCGCG CATGATGACC
AACGCCGGCA CGGCGCAACC CGATCCGAAC GATCCCGCCG GCGACACCGC AGACAACGAG
CAGCCGGGCA AGTCGAAGCC CAAGCCCGGC GACTGA
 
Protein sequence
MAANWIDRAL ASVAPGAARK RLLERQAFEK LARAYDGAAV GRRTDGWRSS SSSADGEIAS 
GASRLRDRMR DLTRNNPHAA KAVAVLVNNI VGAGIRPRAA AGTDALDNRI NELWEAWAAR
SDADGLADFH GLTTLAVREM IEGGDVFLRR RIRRTEDKLP VPLQLQLLEA DHLDDTKIAA
LPDGGRIVRG IEYDAIGRRR AYWLFPDHPG DTSVPLSRSL TSARVPADGI AHLFERQRVQ
SRGVPWGAPA MRAMRDLDDW TNAELVRKKT EACLVGVVLG ADEADQGVAP TVVDAEGKTI
EQFEPGLIAY ARGGKDIKFN QPASTAGVSE WLRAQLHIIA AGYRVPYELL TGDLSQVNYS
SLRGGLVEFR RMVDALQWQL VIPGFCEPVW RWFTEAAWVA GLIPNPVVKV EWQPPRFDAV
DPLKDAQADL LMLRSGTMTL AQAIARQGYD PASQLGEIAE MNSALDRLKI VLDSDPRMMT
NAGTAQPDPN DPAGDTADNE QPGKSKPKPG D