Gene Nwi_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0792 
Symbol 
ID3676070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp877569 
End bp881510 
Gene Length3942 bp 
Protein Length1313 aa 
Translation table11 
GC content65% 
IMG OID637712343 
Productgene transfer agent (GTA) like protein 
Protein accessionYP_317409 
Protein GI75674988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.780926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTC TTCTCCTCAC CGCCGCGGCC TCCGCGCTGA CGGCGGGCGC CTCGGCGTTT 
GTCCAGATCG CTGCGGCTGC CGTCGCCACA GCCGCGGGCG GGTATATCGA TAACCTCCTG
TTCGGGCCGA AGCTCGAAGA CCAGCAGGGA CCACGCCTCG ATAGCTTGCA GGTTCAGGCC
TCCACCGAAG GCGCGCCGAT CCCCGAAATT GCGGGGCGGG TCCGGATCGC CGGGCAGATC
ATCTGGGCAA CAAACTTCAA GGAGGTCGCG ACCACCGAGA AGCAAGGCGG CAAAGGCGGT
GGCGGTGGAT CGGTCAAGAC GACCACCTAT GCCTATTTCG CGAATTTCGC AGTGGGCTTG
TGCGAAGGCC CGATCGATCG GATCGGTCGC ATCTGGGCGG ATGGCAAGCC GCTTTCGATG
GCCGGCATCA CCATGCGGGT CTATCGCGGC ACCGCAAGCC AAGCGCCCGA TCCGCTGATT
GAGGGCGTCG AAGCTGCGGA CAACGCGCCG GCCTATCGCG GCACGGCTTA TGTCGTGTTC
GACAACCTCG CGCTGGAAAA GTTCGGCAAT CGCCTTCCGC AGCTGACCTT CGAGGTGTTC
CGGCGCGTGT CGTCGTCCGA CGGCGATAGC GTTGAGACGA TGGTGCGCGC CGTCACCATG
ATCCCAGGCG CCGGCGAGCG CGCCTATGAC CCCAAAGTTC AGAAACGCAA TCTTGGTGGC
GGTGCGACCA CGCCCGAAAA CGACAGCGCC GGACGATCGA CCTCGGACTG GTCGGTGGCT
CTCGATGATC TCAAGGCCTC GCTGCCAAAT GTCGATACGG TTTTTCTGGT GGTGGGCTGG
TTCGGCGACG ATCTGCGCTG CGGCTCCTGC ACGATCCGCC CGAAGGTCGA AGTCGCCGAC
AAGGTAACGA CGCCGGATTC CTGGATGGTG CATGGCGTCG CGCGATACGG CGCGGCGGTG
ATCTCGCTCA ACGCCGGTCG CCCGTCCTAT GGCGGCACGC CTTCGGATGA TACCGTCGTT
CGTGCCATCC GCGATCTCAA GGCGCGCGGC TATGCCGTCG TGTTCTATCC TTTCGTGTTC
ATGGATGTTC CCGTCGGCAA TGCCCTGCCC AACCCCTATG GCGGAACGGG CCAGCCAGCC
TATCCCTGGC GCGGGCGGAT CACCTGCCAT CCGGCGGCAG GCCAGCCTGG CACGGTGGAC
AAGACCGCGA CGGCCGGGAC GCAGGTCGCC TCGTTCTTCG GTTCCTGCCT GCCCAGCCAT
GTTTCGGTGT CGGTCAACGG CAGCACCGAC GCCGTCGCGA CCAGCTATTC CGGCCCGGCC
GAATGGAGCT TTCGGCGCTT CATTTTTCAC TACGCCAGGC TCTGCGCGGC GGTGAATGCG
ATCGACACCG GCGCCGTCGA TGCTTTCCTG ATCGGCTCGG AAATGCGCGC GCTGGTTTCC
GTGCGCGATA GCGCCACGAA CTTCCCCGCG GTGGCGCGCT TGATGACGCT TGCCGCCGAT
GTGAAGGGCA TTGTCGGCGG CGGCGTGAAG GTGAGTTACG CGGCCGACTG GTCCGACTAC
AATGGCTATC GGCCCACCGA TGGATCGAAT GATGTCTTCT TCCATCTCGA TCCGCTATGG
GCCGACAGCA ATATCGATTT CGTGGGGATC GACTGGTATG CGCCTCTCGC TGATTGGCGC
GATGGCTCCG GCCATCTCGA TCGGCAGGCG GGCGCGTCCT CGATCTATGA TCGTGCCTAT
CTCCAATCGA ACATCGAAGG AGGCGAATTC TTCGATTGGT TCTATGCCTC AGACGCTGCC
CGCAACGCCC AGACGCGCAC AACCATCACC GACGGCGCCT ATGGCAAGCC CTGGGTGTTC
CGTTCCAAGG ATCTCCGGAA CTGGTGGCTG AACCGGCACT ACGATCGCCC GGGTGGTGTT
GAAAACGGAT CGCCGACTGC CTGGCTTGCC GAAATGAAGC CGATCTGGCT CTGCGAACTC
GGCGTGCCCT CGGTCGACAA GGGCGCGAAC CAGCCCAACG TCTTCTACGA TCCGAAATCG
TCCGAAAGCT TCTTCCCGTA TTTCTCGAAG GGCACGCGCG ATGATCTGAT CCAGCGCCGC
GCCATCGAGG CAGTGATCGG CTGGTGGGAG ATGGCCGCGG GCCACAACCC CATCTCCGGC
GTCTATGGCG GGCGGATGAT CGGAACGATC GGCGTCTGGA CTTGGGACGC ACGGCCCTAT
CCCGCCTGGC CGGGTCGCGC CGATCTGTGG TCGGATGGCG ATCTCTATCC GCTCGGCCAC
TGGCTGAACG GCAAGGTCGG GCTTGCCGAT CTTGCCGCGC TCGTCGCAGA ACGCTGCAGG
CGCGTTGGCT TCACCGCCTA TGACGTGTCG ACGCTGGTCG GTGTCGTCAC CGGCTATCTG
CGCGACCGGC CGATGAGCCC GCGCGCCGAA ATCGAGGCGC TCGCCTCGGC CTTCGCCTTC
GACGCGGTGG AAACCGATGG GCTGATCCGC TTCATCCCGC GCGGGCGCAA TTCCGTTGCG
ACGCTCACCC TGCCGGAACT GGCAATACCC GATCAGGGCG AGCGCGAAGA AATCACGCTC
ACGCGCGGGC AGGAAACCGA ACTGCCGAAC GAGGTCGCGA TCGGCTTCAC CGACGCGATC
GACGACTACA AGCCCGGCGC GGTCTCGGCG AACCGGCTTG CCGGCTATTC CGAACGCAAG
AGCGACATCC GGCTGGCCCT CGTACTCGAT CAGGTTCAGG CGCAATCAAT CGCCGATCGT
GCCTTGGTCG AAGCCTGGAT CGAACGCGAA ACGGCGGGCT TTGCTTTGCC GCCCGCGCGG
ATCGCACTCG ATCCAGGCGA CGTTGTCGAT CTCGTCATCA ACGGCAGGCC GCGGGCCTTT
CGGCTGAAGC GCGTCACCGA GCGTGGCGCG CGCGATGTGG AAGCTGTGCG TGCCGAAGCG
GCGATCTACA CGCCGCCGCT CAACGGTATC GCCCCGCCGA CGCTGACGCC GCCGCCGATT
TATGGCGCTG CGGTCTTGCG CCTGATGGAC CTGCCGCTGC TTCGCGACAG CGATGATGGC
TTCTCGCCCT ATGCTGCCGC GTCGGCGGCG CCCTGGGGCG GCGTGGTGGT TATGGATAGC
GCCACCGGCT CGGATTTCAC GCTCGATACC ACGCTCGCTG TTCGCGCCAC GCTCGGCGAA
ACGATCCAAC CCTTCCCGGC CGGGCCGACT GAGTATTGGG ACGAAGCCTC AGTCCTCGAA
GTGAAGCTCT ATGCCGGGGA ACTGGCGAGC GCGATGCCAG AAGCGATCCT GACCGGCAGC
ACGAACAGCC TCGCGATCGG CACGCCCGAT GGTGATTGGG AGATCGTTCA GTTCGCAGAC
GCCGTGCTAA CGGCTCCGCA GACCTATCGG TTGACCAAGC TGCTGCGCGG GCGGCTTGGA
ACCGAGCATG CCATGCGGCC GCCGCTCGCC CTCGGCGCGC CGGTGGTTCT GCTCAACGAG
GCCGTCTTGA AGATCGACGG CAAGCCCGCC GAACGGCTCG CTGCCCGCTT CTATCGCTGG
GGACCGCCTG CGCTCGATAT CGCCGATCCC GCCTGGCAGC AGACGACCTA CGCCACGAAA
GCCGCCGGCC GCATGCCGTG GTCACCGGTC CAGATTACGG GCGCGCGCAA TGGGGGCGGC
GATCTCGCCA TCACCTGGGT TCGACGCACG CGCTTCGGCG GCGTCTGGGC GGATGGCGTC
GATGTTCCGC TCAATGAAGA AAGTGAGCGC TACGAGGTCG ATGTGATGAA CGGCGCGAAC
GTCGTCCGCA CCATCGCCGT GATCACACCA ACTGCCACTG CCGGATACAC CGCCGCCCAG
CAGGTCGCGG ATTTCGGCTC GGCGCAAAGT AGCATCACCA TCCGCGTCTA TCAGCTCTCC
GCCGTCGTCG GTCGCGGCTG GCCGGGCGTT GCAACACTCT GA
 
Protein sequence
MAVLLLTAAA SALTAGASAF VQIAAAAVAT AAGGYIDNLL FGPKLEDQQG PRLDSLQVQA 
STEGAPIPEI AGRVRIAGQI IWATNFKEVA TTEKQGGKGG GGGSVKTTTY AYFANFAVGL
CEGPIDRIGR IWADGKPLSM AGITMRVYRG TASQAPDPLI EGVEAADNAP AYRGTAYVVF
DNLALEKFGN RLPQLTFEVF RRVSSSDGDS VETMVRAVTM IPGAGERAYD PKVQKRNLGG
GATTPENDSA GRSTSDWSVA LDDLKASLPN VDTVFLVVGW FGDDLRCGSC TIRPKVEVAD
KVTTPDSWMV HGVARYGAAV ISLNAGRPSY GGTPSDDTVV RAIRDLKARG YAVVFYPFVF
MDVPVGNALP NPYGGTGQPA YPWRGRITCH PAAGQPGTVD KTATAGTQVA SFFGSCLPSH
VSVSVNGSTD AVATSYSGPA EWSFRRFIFH YARLCAAVNA IDTGAVDAFL IGSEMRALVS
VRDSATNFPA VARLMTLAAD VKGIVGGGVK VSYAADWSDY NGYRPTDGSN DVFFHLDPLW
ADSNIDFVGI DWYAPLADWR DGSGHLDRQA GASSIYDRAY LQSNIEGGEF FDWFYASDAA
RNAQTRTTIT DGAYGKPWVF RSKDLRNWWL NRHYDRPGGV ENGSPTAWLA EMKPIWLCEL
GVPSVDKGAN QPNVFYDPKS SESFFPYFSK GTRDDLIQRR AIEAVIGWWE MAAGHNPISG
VYGGRMIGTI GVWTWDARPY PAWPGRADLW SDGDLYPLGH WLNGKVGLAD LAALVAERCR
RVGFTAYDVS TLVGVVTGYL RDRPMSPRAE IEALASAFAF DAVETDGLIR FIPRGRNSVA
TLTLPELAIP DQGEREEITL TRGQETELPN EVAIGFTDAI DDYKPGAVSA NRLAGYSERK
SDIRLALVLD QVQAQSIADR ALVEAWIERE TAGFALPPAR IALDPGDVVD LVINGRPRAF
RLKRVTERGA RDVEAVRAEA AIYTPPLNGI APPTLTPPPI YGAAVLRLMD LPLLRDSDDG
FSPYAAASAA PWGGVVVMDS ATGSDFTLDT TLAVRATLGE TIQPFPAGPT EYWDEASVLE
VKLYAGELAS AMPEAILTGS TNSLAIGTPD GDWEIVQFAD AVLTAPQTYR LTKLLRGRLG
TEHAMRPPLA LGAPVVLLNE AVLKIDGKPA ERLAARFYRW GPPALDIADP AWQQTTYATK
AAGRMPWSPV QITGARNGGG DLAITWVRRT RFGGVWADGV DVPLNEESER YEVDVMNGAN
VVRTIAVITP TATAGYTAAQ QVADFGSAQS SITIRVYQLS AVVGRGWPGV ATL