Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0792 |
Symbol | |
ID | 3676070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 877569 |
End bp | 881510 |
Gene Length | 3942 bp |
Protein Length | 1313 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637712343 |
Product | gene transfer agent (GTA) like protein |
Protein accession | YP_317409 |
Protein GI | 75674988 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.780926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGTTC TTCTCCTCAC CGCCGCGGCC TCCGCGCTGA CGGCGGGCGC CTCGGCGTTT GTCCAGATCG CTGCGGCTGC CGTCGCCACA GCCGCGGGCG GGTATATCGA TAACCTCCTG TTCGGGCCGA AGCTCGAAGA CCAGCAGGGA CCACGCCTCG ATAGCTTGCA GGTTCAGGCC TCCACCGAAG GCGCGCCGAT CCCCGAAATT GCGGGGCGGG TCCGGATCGC CGGGCAGATC ATCTGGGCAA CAAACTTCAA GGAGGTCGCG ACCACCGAGA AGCAAGGCGG CAAAGGCGGT GGCGGTGGAT CGGTCAAGAC GACCACCTAT GCCTATTTCG CGAATTTCGC AGTGGGCTTG TGCGAAGGCC CGATCGATCG GATCGGTCGC ATCTGGGCGG ATGGCAAGCC GCTTTCGATG GCCGGCATCA CCATGCGGGT CTATCGCGGC ACCGCAAGCC AAGCGCCCGA TCCGCTGATT GAGGGCGTCG AAGCTGCGGA CAACGCGCCG GCCTATCGCG GCACGGCTTA TGTCGTGTTC GACAACCTCG CGCTGGAAAA GTTCGGCAAT CGCCTTCCGC AGCTGACCTT CGAGGTGTTC CGGCGCGTGT CGTCGTCCGA CGGCGATAGC GTTGAGACGA TGGTGCGCGC CGTCACCATG ATCCCAGGCG CCGGCGAGCG CGCCTATGAC CCCAAAGTTC AGAAACGCAA TCTTGGTGGC GGTGCGACCA CGCCCGAAAA CGACAGCGCC GGACGATCGA CCTCGGACTG GTCGGTGGCT CTCGATGATC TCAAGGCCTC GCTGCCAAAT GTCGATACGG TTTTTCTGGT GGTGGGCTGG TTCGGCGACG ATCTGCGCTG CGGCTCCTGC ACGATCCGCC CGAAGGTCGA AGTCGCCGAC AAGGTAACGA CGCCGGATTC CTGGATGGTG CATGGCGTCG CGCGATACGG CGCGGCGGTG ATCTCGCTCA ACGCCGGTCG CCCGTCCTAT GGCGGCACGC CTTCGGATGA TACCGTCGTT CGTGCCATCC GCGATCTCAA GGCGCGCGGC TATGCCGTCG TGTTCTATCC TTTCGTGTTC ATGGATGTTC CCGTCGGCAA TGCCCTGCCC AACCCCTATG GCGGAACGGG CCAGCCAGCC TATCCCTGGC GCGGGCGGAT CACCTGCCAT CCGGCGGCAG GCCAGCCTGG CACGGTGGAC AAGACCGCGA CGGCCGGGAC GCAGGTCGCC TCGTTCTTCG GTTCCTGCCT GCCCAGCCAT GTTTCGGTGT CGGTCAACGG CAGCACCGAC GCCGTCGCGA CCAGCTATTC CGGCCCGGCC GAATGGAGCT TTCGGCGCTT CATTTTTCAC TACGCCAGGC TCTGCGCGGC GGTGAATGCG ATCGACACCG GCGCCGTCGA TGCTTTCCTG ATCGGCTCGG AAATGCGCGC GCTGGTTTCC GTGCGCGATA GCGCCACGAA CTTCCCCGCG GTGGCGCGCT TGATGACGCT TGCCGCCGAT GTGAAGGGCA TTGTCGGCGG CGGCGTGAAG GTGAGTTACG CGGCCGACTG GTCCGACTAC AATGGCTATC GGCCCACCGA TGGATCGAAT GATGTCTTCT TCCATCTCGA TCCGCTATGG GCCGACAGCA ATATCGATTT CGTGGGGATC GACTGGTATG CGCCTCTCGC TGATTGGCGC GATGGCTCCG GCCATCTCGA TCGGCAGGCG GGCGCGTCCT CGATCTATGA TCGTGCCTAT CTCCAATCGA ACATCGAAGG AGGCGAATTC TTCGATTGGT TCTATGCCTC AGACGCTGCC CGCAACGCCC AGACGCGCAC AACCATCACC GACGGCGCCT ATGGCAAGCC CTGGGTGTTC CGTTCCAAGG ATCTCCGGAA CTGGTGGCTG AACCGGCACT ACGATCGCCC GGGTGGTGTT GAAAACGGAT CGCCGACTGC CTGGCTTGCC GAAATGAAGC CGATCTGGCT CTGCGAACTC GGCGTGCCCT CGGTCGACAA GGGCGCGAAC CAGCCCAACG TCTTCTACGA TCCGAAATCG TCCGAAAGCT TCTTCCCGTA TTTCTCGAAG GGCACGCGCG ATGATCTGAT CCAGCGCCGC GCCATCGAGG CAGTGATCGG CTGGTGGGAG ATGGCCGCGG GCCACAACCC CATCTCCGGC GTCTATGGCG GGCGGATGAT CGGAACGATC GGCGTCTGGA CTTGGGACGC ACGGCCCTAT CCCGCCTGGC CGGGTCGCGC CGATCTGTGG TCGGATGGCG ATCTCTATCC GCTCGGCCAC TGGCTGAACG GCAAGGTCGG GCTTGCCGAT CTTGCCGCGC TCGTCGCAGA ACGCTGCAGG CGCGTTGGCT TCACCGCCTA TGACGTGTCG ACGCTGGTCG GTGTCGTCAC CGGCTATCTG CGCGACCGGC CGATGAGCCC GCGCGCCGAA ATCGAGGCGC TCGCCTCGGC CTTCGCCTTC GACGCGGTGG AAACCGATGG GCTGATCCGC TTCATCCCGC GCGGGCGCAA TTCCGTTGCG ACGCTCACCC TGCCGGAACT GGCAATACCC GATCAGGGCG AGCGCGAAGA AATCACGCTC ACGCGCGGGC AGGAAACCGA ACTGCCGAAC GAGGTCGCGA TCGGCTTCAC CGACGCGATC GACGACTACA AGCCCGGCGC GGTCTCGGCG AACCGGCTTG CCGGCTATTC CGAACGCAAG AGCGACATCC GGCTGGCCCT CGTACTCGAT CAGGTTCAGG CGCAATCAAT CGCCGATCGT GCCTTGGTCG AAGCCTGGAT CGAACGCGAA ACGGCGGGCT TTGCTTTGCC GCCCGCGCGG ATCGCACTCG ATCCAGGCGA CGTTGTCGAT CTCGTCATCA ACGGCAGGCC GCGGGCCTTT CGGCTGAAGC GCGTCACCGA GCGTGGCGCG CGCGATGTGG AAGCTGTGCG TGCCGAAGCG GCGATCTACA CGCCGCCGCT CAACGGTATC GCCCCGCCGA CGCTGACGCC GCCGCCGATT TATGGCGCTG CGGTCTTGCG CCTGATGGAC CTGCCGCTGC TTCGCGACAG CGATGATGGC TTCTCGCCCT ATGCTGCCGC GTCGGCGGCG CCCTGGGGCG GCGTGGTGGT TATGGATAGC GCCACCGGCT CGGATTTCAC GCTCGATACC ACGCTCGCTG TTCGCGCCAC GCTCGGCGAA ACGATCCAAC CCTTCCCGGC CGGGCCGACT GAGTATTGGG ACGAAGCCTC AGTCCTCGAA GTGAAGCTCT ATGCCGGGGA ACTGGCGAGC GCGATGCCAG AAGCGATCCT GACCGGCAGC ACGAACAGCC TCGCGATCGG CACGCCCGAT GGTGATTGGG AGATCGTTCA GTTCGCAGAC GCCGTGCTAA CGGCTCCGCA GACCTATCGG TTGACCAAGC TGCTGCGCGG GCGGCTTGGA ACCGAGCATG CCATGCGGCC GCCGCTCGCC CTCGGCGCGC CGGTGGTTCT GCTCAACGAG GCCGTCTTGA AGATCGACGG CAAGCCCGCC GAACGGCTCG CTGCCCGCTT CTATCGCTGG GGACCGCCTG CGCTCGATAT CGCCGATCCC GCCTGGCAGC AGACGACCTA CGCCACGAAA GCCGCCGGCC GCATGCCGTG GTCACCGGTC CAGATTACGG GCGCGCGCAA TGGGGGCGGC GATCTCGCCA TCACCTGGGT TCGACGCACG CGCTTCGGCG GCGTCTGGGC GGATGGCGTC GATGTTCCGC TCAATGAAGA AAGTGAGCGC TACGAGGTCG ATGTGATGAA CGGCGCGAAC GTCGTCCGCA CCATCGCCGT GATCACACCA ACTGCCACTG CCGGATACAC CGCCGCCCAG CAGGTCGCGG ATTTCGGCTC GGCGCAAAGT AGCATCACCA TCCGCGTCTA TCAGCTCTCC GCCGTCGTCG GTCGCGGCTG GCCGGGCGTT GCAACACTCT GA
|
Protein sequence | MAVLLLTAAA SALTAGASAF VQIAAAAVAT AAGGYIDNLL FGPKLEDQQG PRLDSLQVQA STEGAPIPEI AGRVRIAGQI IWATNFKEVA TTEKQGGKGG GGGSVKTTTY AYFANFAVGL CEGPIDRIGR IWADGKPLSM AGITMRVYRG TASQAPDPLI EGVEAADNAP AYRGTAYVVF DNLALEKFGN RLPQLTFEVF RRVSSSDGDS VETMVRAVTM IPGAGERAYD PKVQKRNLGG GATTPENDSA GRSTSDWSVA LDDLKASLPN VDTVFLVVGW FGDDLRCGSC TIRPKVEVAD KVTTPDSWMV HGVARYGAAV ISLNAGRPSY GGTPSDDTVV RAIRDLKARG YAVVFYPFVF MDVPVGNALP NPYGGTGQPA YPWRGRITCH PAAGQPGTVD KTATAGTQVA SFFGSCLPSH VSVSVNGSTD AVATSYSGPA EWSFRRFIFH YARLCAAVNA IDTGAVDAFL IGSEMRALVS VRDSATNFPA VARLMTLAAD VKGIVGGGVK VSYAADWSDY NGYRPTDGSN DVFFHLDPLW ADSNIDFVGI DWYAPLADWR DGSGHLDRQA GASSIYDRAY LQSNIEGGEF FDWFYASDAA RNAQTRTTIT DGAYGKPWVF RSKDLRNWWL NRHYDRPGGV ENGSPTAWLA EMKPIWLCEL GVPSVDKGAN QPNVFYDPKS SESFFPYFSK GTRDDLIQRR AIEAVIGWWE MAAGHNPISG VYGGRMIGTI GVWTWDARPY PAWPGRADLW SDGDLYPLGH WLNGKVGLAD LAALVAERCR RVGFTAYDVS TLVGVVTGYL RDRPMSPRAE IEALASAFAF DAVETDGLIR FIPRGRNSVA TLTLPELAIP DQGEREEITL TRGQETELPN EVAIGFTDAI DDYKPGAVSA NRLAGYSERK SDIRLALVLD QVQAQSIADR ALVEAWIERE TAGFALPPAR IALDPGDVVD LVINGRPRAF RLKRVTERGA RDVEAVRAEA AIYTPPLNGI APPTLTPPPI YGAAVLRLMD LPLLRDSDDG FSPYAAASAA PWGGVVVMDS ATGSDFTLDT TLAVRATLGE TIQPFPAGPT EYWDEASVLE VKLYAGELAS AMPEAILTGS TNSLAIGTPD GDWEIVQFAD AVLTAPQTYR LTKLLRGRLG TEHAMRPPLA LGAPVVLLNE AVLKIDGKPA ERLAARFYRW GPPALDIADP AWQQTTYATK AAGRMPWSPV QITGARNGGG DLAITWVRRT RFGGVWADGV DVPLNEESER YEVDVMNGAN VVRTIAVITP TATAGYTAAQ QVADFGSAQS SITIRVYQLS AVVGRGWPGV ATL
|
| |