Gene Nwi_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0707 
Symbol 
ID3674953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp789068 
End bp789709 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content60% 
IMG OID637712258 
ProductISRm2011-2 transposase protein 
Protein accessionYP_317325 
Protein GI75674904 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.327087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGTTC GTTCACGCTG TGAAGCTCAG TTACAAAAAA AGACGCTGAT TGCTGCAGAG 
CAGGATCGTC CCGATGTCGC CCGTCGGCGA GCGCAATGGA CCAAGTATCG AGATCGGATT
GATCCCACTC GGCTGGTGTT CATCGATGAG ACCTGGACCA AAACCAATAT GGCGCCGCTG
CGGGGCTGGG CGCCGCGCGG TCAACGCATC AGAGCCAAGG TGCCGCATGG CCGCTGGCAG
ACCATGACCT TTATGGCCGC TCTGCGCCAC GATCGCATCA CCGCGCCGTG GTTCATCGAG
GGGCCGATCA ACGGCGAAGC CTTCCTTCTC TACATCGAGA AGGTTCTGGT CCCGACCCTG
CGGCACGGCG ACATCGTCAT TATGGACAAC CTCGGCTCGC ACAAGGCCAG CGCCGTGCGT
CGCGTCATCC GTGCCGCCGG TGCCCGGCTC TTCTACCTGC CGAAATACTC GCCTGATCTG
AACCCGATCG AGCAGTTCTT TGCCAAGTTC AAACACTGGC TACGCAAAGC CGCGCAGCGG
ACCACCGAGG CCGTCTACAA TGCTATCGCT CCGATCCTCG AAACCGTTGC ACCGGCTGAA
TGCGCCAACT ACTTCGTCAA TGCAGGATAC AACCAAATCT AA
 
Protein sequence
MGVRSRCEAQ LQKKTLIAAE QDRPDVARRR AQWTKYRDRI DPTRLVFIDE TWTKTNMAPL 
RGWAPRGQRI RAKVPHGRWQ TMTFMAALRH DRITAPWFIE GPINGEAFLL YIEKVLVPTL
RHGDIVIMDN LGSHKASAVR RVIRAAGARL FYLPKYSPDL NPIEQFFAKF KHWLRKAAQR
TTEAVYNAIA PILETVAPAE CANYFVNAGY NQI