Gene Nwi_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0706 
Symbol 
ID3674952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp788265 
End bp788825 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content65% 
IMG OID637712257 
Productinvasion associated locus B 
Protein accessionYP_317324 
Protein GI75674903 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.488377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCC GCTTTATGAG AACGTGCCTG CTCACCCTTG CCGCCGCAAT CACGACCGTT 
GCCATGACTG CGGCTCATGC GCAGCAACCG GCCACGCCGG CGGCGTCTAC GCTGCCGAAC
GGGGCCGCCT CGGTGAGCGA GACCTACGGC GACTGGACGG TGGACTGCCG GCTCGTCGAT
CGGCGGAAGC AATGTCTGCT GTCGCAGGTG CAGGGCAACA AGGAAACCGG CAGGCGCGTT
TACGCTATCG AACTGACGCC TCCCGCAGGC GGCAAGATCG AGGGTACGAT CCTGATGCCG
TTCGGGCTCA ATCTCGATGC CGGCGCGGTG CTCAAGCTCG ACGACAAGGA CCTTGGCAAG
GGGCTGCGCT TCTCCACTTG CGTGCCGCAG GGCTGCCTGT TGCCGGTGAG CTTTCCGGCC
ACGGCCACGG ACGCCATGCG GAAGGGCACG AAACTCGTGG TCGCTTCCCT CAACCTCTCC
AGCAACGAGC CCGTCACCTT CAGCGTCTCG CTGAACGGCT TCGCCGCCGC GCTGGCGCGG
GTGACAGAAC TCGCGAAATA A
 
Protein sequence
MSARFMRTCL LTLAAAITTV AMTAAHAQQP ATPAASTLPN GAASVSETYG DWTVDCRLVD 
RRKQCLLSQV QGNKETGRRV YAIELTPPAG GKIEGTILMP FGLNLDAGAV LKLDDKDLGK
GLRFSTCVPQ GCLLPVSFPA TATDAMRKGT KLVVASLNLS SNEPVTFSVS LNGFAAALAR
VTELAK