Gene Nwi_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0653 
Symbol 
ID3676229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp732820 
End bp734415 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content61% 
IMG OID637712204 
Productbeta-lactamase 
Protein accessionYP_317271 
Protein GI75674850 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTGC AGAAATCTGT TGTCGCATTT CGCCCGAGGG CAATCCTCGC AAAGCTGGTC 
GCCTCGTCCT TGGTCTGGGC TTGTGCGGCG ATACCGGGTT TTGCGGAGAC ATCGCCTCCC
CAGACCTCAG GCGTACCCAT TGCCGACGGT CAGATCGACG AGGCCGTGGC GGGTCTCGAC
GCGATCGCCA CCGGCGTCAT GAAAAAGACC GGCATTCCGG GCATGGCGGT TGCGGTGGTG
CGTGATGGCA AGATCGCCTA CGCGAAGGGT TTCGGCGTCC GGAAAGTTGG CGAGAACCAG
CCGATTGACG CGAACACTGT TTTTCAGATC GCATCGCTTT CAAAATCTAT CGCGGCCACC
GTCGTGGCTC GCCAGGTCGG CGCGGACGTC GTCAAGTGGA ACACGCCTGT CCAGGCGCAC
TTGCCCTGGT TCAGGTTGAT GGACCCGTGG GTGACGCAGC ATGTCACGAT CGCCGATTTG
TTCAGCCACC GTTCGGGGTT GCCGGACCAC GCCGGCGACG ATCTAGAGGA TCTCGGCTAT
GGTCGCCGAG CTGTGCTGGA GCGCCTGCGC CTGCTGCCGC TTCACGGTTT CCGGGACGTC
TATGCCTACA CGAATTTCGG GCTGACCGCG GCGGCGGAAG CCGTCGCCGC CGCATCAGGC
AAGGACTGGG AAAGCCTGTC TGAAGAGGTT CTTTATAAAC CGCTCGGGAT GAGCGCGACC
AGTTCGCGCT TTGCTGATTT TGAAAAGCAG GCCAATCGCG CCATTGGACA TGTAAGGGGC
GGCGACGGCT TCCAGCCAAA GTATCAACGC CGGCCCGATG CGCAGTCACC CGCAGGCGGT
GTCAGTTCGT CGGCAAACGA TCTTGCCCGA TGGCTGGCGT TGGTGTTGCG GAACGGCGAA
TTCGAAGGCC GGCAGGTCAT TCCAGCGGAT GCTCTGCTTC CAGCCATGAC CGCCGAGGTC
GTTTCGATTC ATTCCCCTTC AGCCGATGCG AGAGCCAGCC TGTACGGATA TGGATTTGGC
GTCGGAGTCA CGCCTGCGGG ACGAACAATG ATCAGTCATT CCGGGGCCTT CGCGCTGGGT
GCAGGAACCC ATTACACGAT CATCCCTTCG GCCGGGATCG GGATCGTCGT GCTGACCAAC
GCGGAACCGG TCGGCGCGGC GGAGGCGGTC GGGGCCTCGT TCATGGATCT TGTTCAGTTC
GGGAAGATCA CGCGGGACTG GCTTGCTGCC TATAGCGGGG TGATGGCGCA GCTTACGGCG
CCGGCAGGCG ATCTCGTCGG CAAGTCGCCG CCCGCTAAAC CAGCGCCGGC TGCCAGTTCT
ACATCCTATG TTGGCCGCTA CGGCAGTCCC TATTTCGGAG ATGCCGAGAT CGTCGATGCA
AACGGTCATA TGGAGCTGAA GATCGGCCGT TTGAGCCGAT CGTACACGTT GACGCACTGG
GATGGCGACG TGTTTTCGAT CAAACCTTCC AGCGAGAACC AAACCGACGG TTCGGTGTCG
TCGGTTACTT TCAAGCGAAC TGGCGACGAG CCGGCCAGCG AACTGACTAT CGAGTTTCTC
AACGACAATG GGCTCGGCCA GTTCATGAGG CGCTGA
 
Protein sequence
MFLQKSVVAF RPRAILAKLV ASSLVWACAA IPGFAETSPP QTSGVPIADG QIDEAVAGLD 
AIATGVMKKT GIPGMAVAVV RDGKIAYAKG FGVRKVGENQ PIDANTVFQI ASLSKSIAAT
VVARQVGADV VKWNTPVQAH LPWFRLMDPW VTQHVTIADL FSHRSGLPDH AGDDLEDLGY
GRRAVLERLR LLPLHGFRDV YAYTNFGLTA AAEAVAAASG KDWESLSEEV LYKPLGMSAT
SSRFADFEKQ ANRAIGHVRG GDGFQPKYQR RPDAQSPAGG VSSSANDLAR WLALVLRNGE
FEGRQVIPAD ALLPAMTAEV VSIHSPSADA RASLYGYGFG VGVTPAGRTM ISHSGAFALG
AGTHYTIIPS AGIGIVVLTN AEPVGAAEAV GASFMDLVQF GKITRDWLAA YSGVMAQLTA
PAGDLVGKSP PAKPAPAASS TSYVGRYGSP YFGDAEIVDA NGHMELKIGR LSRSYTLTHW
DGDVFSIKPS SENQTDGSVS SVTFKRTGDE PASELTIEFL NDNGLGQFMR R