Gene Nwi_0632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0632 
Symbol 
ID3676245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp710792 
End bp711547 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID637712183 
Producthemolysin A 
Protein accessionYP_317251 
Protein GI75674830 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0985618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACC GCGAAAAGAG CGAACCCCGC GCCCGCAAGC GCGCCGACGT CCTGCTGGTC 
GAGCGTGGCC TGTTCGAGAG CAGGGCGCGG GCTCAAGCCG CGATCGAGGC CGGGTTCGTG
ACCGCCGACG GAAAGCCGGT GACGAAGGTT TCCGAGGCGG TTGACGTCAG CGCCGCGATC
GAGGCGCAAC CCGCGCACCC CTACGTATCG CGCGGCGGCG TGAAACTCGC CGGCGCGCTC
GCGGCGTATC CGGTCGAAAT CGAGGACCAT GTCTGCCTTG ATGTCGGCGC TTCGACCGGT
GGCTTCACCG AAGTGCTGTT GAGCGAGGGT GCGGCGCTGG TGTTCGCCGT CGATGTCGGC
CACGATCAAC TGCATCCGAG CCTGCGCGGC GATCCCCGGG TGGTATCGAT GGAGTCCACC
GATATCCGCT CGCTGGAAGG TAAACGGCTG CCGCAGCGGC CGAACGTGGT GGTGATGGAT
GCAAGCTTCA TTTCGCTGAA AGCCATCCTG CCGGCGGCGC TGGCGCTGGC GGCGGCGCAG
ATGCACCTGC TGGCGTTGAT CAAACCGCAA TTCGAGGCGC CGCGCGCCGC GATCAGGAAA
GGCATCGTCC GCGACGCGGC GGTGCACCGG GCGGTGTGCG ACGATATCGC CGCCTTCGCG
TCGACCCTGG GGTGCAGCCA TATCGAGATT TTCCCGTCCC CGATCCGGGG CGGCGACGGC
AACATCGAAT TCTTCCTCGG CGCCCGCCGT GGCTGA
 
Protein sequence
MANREKSEPR ARKRADVLLV ERGLFESRAR AQAAIEAGFV TADGKPVTKV SEAVDVSAAI 
EAQPAHPYVS RGGVKLAGAL AAYPVEIEDH VCLDVGASTG GFTEVLLSEG AALVFAVDVG
HDQLHPSLRG DPRVVSMEST DIRSLEGKRL PQRPNVVVMD ASFISLKAIL PAALALAAAQ
MHLLALIKPQ FEAPRAAIRK GIVRDAAVHR AVCDDIAAFA STLGCSHIEI FPSPIRGGDG
NIEFFLGARR G