Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0629 |
Symbol | |
ID | 3676242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 707876 |
End bp | 708982 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637712180 |
Product | chorismate synthase |
Protein accession | YP_317248 |
Protein GI | 162139849 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.548293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCACA ATACCTTCGG TCACCTGTTC CGTGTCACGA CCTTTGGCGA GAGCCACGGG GTCGCGATCG GCTGCGTGGT CGATGGTTGT CCCCCGATGC TGCCGCTCAC GGCCGAGGAA ATCCAGCGCG ATCTCGATCG CCGCCGTCCC GGCCAATCGC GGTTCACCAC GCAGCGGCAG GAGCCGGATG CGGTGAAGAT CCTGTCCGGG GTCATGCCGC ACCCCGGCAC AGGCGAGCAG GTGACAACGG GTGCGCCGAT CGGGCTTCTG ATCGAGAATA CCGATCAGCG ATCGAAGGAC TACTCCGACA TCAAGGACAA GTTTCGCCCC GGTCATGCCG ACTTCACCTA TGAGGCGAAA TACGGCATCC GAGACTATCG CGGGGGCGGG CGCTCCTCGG CGCGCGAGAC CGCGATGCGG GTCGCCGCCG GCGCCATCGC GCGCAAGGTT GTCTCCGGCA TGAGGGTGCG TGGCGCTCTG GTTCAGATGG GGCCGCACAA GATCGATCGG GACAAATGGG ATTGGGACGA GATCGCGAGG AATCCGTTCT TCTGTCCCGA CAAGGACAAG GCTGCGTTCT TCGAGAGCTA TCTTGACGGC ATCCGCAAAA GCGGCTCCTC GATCGGCGCC GTGATCGAGG TGGTGGCCGA TGGGGTGCCC GCAGGACTTG GCGCGCCGAT CTATGCCAAG CTCGACGGCG ACCTGGCCGC GGCGCTGATG AGCATCAATG CGGTCAAGGG CGTGGAGATC GGCGCCGGCT TCGGAGCCGC CGCGTTGACC GGGGAGGAGA ACGCCGACGA GATGCGCAGT TCTTCGTCCG ATATGGGCAA CCACGGCCCG GTGTTCACCT CCAACCATGC CGGCGGCATT CTCGGCGGCA TATCCACCGG TCAGCCCATC GTGGCGCGGT TCGCGGTGAA GCCGACGTCG TCGATCCTGT CGCCGCGCAA GACCGTCGAT CGCAACGGAG CCGAAACAGA CATCTTCACC AGGGGCCGTC ACGATCCCTG CGTCGGCATC CGGGCGGTGC CGGTGGGAGA GGCCATGGTT GCCTGCGTTC TGGCGGATCA TGTCCTGCGA CATCGAGGGC AGGTCGGCGC GAGTTAG
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Protein sequence | MSHNTFGHLF RVTTFGESHG VAIGCVVDGC PPMLPLTAEE IQRDLDRRRP GQSRFTTQRQ EPDAVKILSG VMPHPGTGEQ VTTGAPIGLL IENTDQRSKD YSDIKDKFRP GHADFTYEAK YGIRDYRGGG RSSARETAMR VAAGAIARKV VSGMRVRGAL VQMGPHKIDR DKWDWDEIAR NPFFCPDKDK AAFFESYLDG IRKSGSSIGA VIEVVADGVP AGLGAPIYAK LDGDLAAALM SINAVKGVEI GAGFGAAALT GEENADEMRS SSSDMGNHGP VFTSNHAGGI LGGISTGQPI VARFAVKPTS SILSPRKTVD RNGAETDIFT RGRHDPCVGI RAVPVGEAMV ACVLADHVLR HRGQVGAS
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