Gene Nwi_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0629 
Symbol 
ID3676242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp707876 
End bp708982 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content65% 
IMG OID637712180 
Productchorismate synthase 
Protein accessionYP_317248 
Protein GI162139849 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.548293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACA ATACCTTCGG TCACCTGTTC CGTGTCACGA CCTTTGGCGA GAGCCACGGG 
GTCGCGATCG GCTGCGTGGT CGATGGTTGT CCCCCGATGC TGCCGCTCAC GGCCGAGGAA
ATCCAGCGCG ATCTCGATCG CCGCCGTCCC GGCCAATCGC GGTTCACCAC GCAGCGGCAG
GAGCCGGATG CGGTGAAGAT CCTGTCCGGG GTCATGCCGC ACCCCGGCAC AGGCGAGCAG
GTGACAACGG GTGCGCCGAT CGGGCTTCTG ATCGAGAATA CCGATCAGCG ATCGAAGGAC
TACTCCGACA TCAAGGACAA GTTTCGCCCC GGTCATGCCG ACTTCACCTA TGAGGCGAAA
TACGGCATCC GAGACTATCG CGGGGGCGGG CGCTCCTCGG CGCGCGAGAC CGCGATGCGG
GTCGCCGCCG GCGCCATCGC GCGCAAGGTT GTCTCCGGCA TGAGGGTGCG TGGCGCTCTG
GTTCAGATGG GGCCGCACAA GATCGATCGG GACAAATGGG ATTGGGACGA GATCGCGAGG
AATCCGTTCT TCTGTCCCGA CAAGGACAAG GCTGCGTTCT TCGAGAGCTA TCTTGACGGC
ATCCGCAAAA GCGGCTCCTC GATCGGCGCC GTGATCGAGG TGGTGGCCGA TGGGGTGCCC
GCAGGACTTG GCGCGCCGAT CTATGCCAAG CTCGACGGCG ACCTGGCCGC GGCGCTGATG
AGCATCAATG CGGTCAAGGG CGTGGAGATC GGCGCCGGCT TCGGAGCCGC CGCGTTGACC
GGGGAGGAGA ACGCCGACGA GATGCGCAGT TCTTCGTCCG ATATGGGCAA CCACGGCCCG
GTGTTCACCT CCAACCATGC CGGCGGCATT CTCGGCGGCA TATCCACCGG TCAGCCCATC
GTGGCGCGGT TCGCGGTGAA GCCGACGTCG TCGATCCTGT CGCCGCGCAA GACCGTCGAT
CGCAACGGAG CCGAAACAGA CATCTTCACC AGGGGCCGTC ACGATCCCTG CGTCGGCATC
CGGGCGGTGC CGGTGGGAGA GGCCATGGTT GCCTGCGTTC TGGCGGATCA TGTCCTGCGA
CATCGAGGGC AGGTCGGCGC GAGTTAG
 
Protein sequence
MSHNTFGHLF RVTTFGESHG VAIGCVVDGC PPMLPLTAEE IQRDLDRRRP GQSRFTTQRQ 
EPDAVKILSG VMPHPGTGEQ VTTGAPIGLL IENTDQRSKD YSDIKDKFRP GHADFTYEAK
YGIRDYRGGG RSSARETAMR VAAGAIARKV VSGMRVRGAL VQMGPHKIDR DKWDWDEIAR
NPFFCPDKDK AAFFESYLDG IRKSGSSIGA VIEVVADGVP AGLGAPIYAK LDGDLAAALM
SINAVKGVEI GAGFGAAALT GEENADEMRS SSSDMGNHGP VFTSNHAGGI LGGISTGQPI
VARFAVKPTS SILSPRKTVD RNGAETDIFT RGRHDPCVGI RAVPVGEAMV ACVLADHVLR
HRGQVGAS