| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0603 |
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| Symbol | mnmA |
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| ID | 3676270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 682417 |
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| End bp | 683619 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637712153 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_317222 |
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| Protein GI | 75674801 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.365689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACA GTCTGGATTT GGAAGGTCGT CCTCAGGACA CCCGGGTCGT GGTCGCCATG
TCGGGCGGCG TCGATTCGTC GGTGACGGCC GCGCTGTTGA AGTCGGAAGG GTACGACGTC
GTCGGGATAA CCCTGCAGCT TTACGATCAT GGCGCCGCGA CCCACCGCAA GGGCGCCTGC
TGCGCCGGCC AGGACATTCA TGACGCGCGA AACGTGGCGG CGCGGCTTGG CGTCCCGCAC
TATGTGCTGG ATTACGAAAG CCGCTTCCGC GAAACCGTGA TCGAGAATTT CGCGGACAGC
TATGCGTCGG GCGAGACGCC GGTGCCTTGC ATCGAATGCA ACCGGCAGGT CAAATTCCGC
GATCTGCTGG CCACCGCGCG CGAGCTTGGC GCGGCTGCGC TGGCGACGGG TCATTACGTC
TCCTCGCGCC GTTTGGCCGA TGGATCGCGC GCGCTGCTCT GCGCGGCGGA CACTGACCGC
GACCAGAGCT ATTTCCTGTT CGCCACCACG AGGGAGCAGC TCGATTTTCT GCGCTTTCCG
CTCGGCGATA TGACCAAGCA GCAGACCCGC GAACTGGCGC GCCGCTTCGG TCTATCGGTC
GCCGACAAAC ATGACAGCCA GGATATCTGC TTCGTGCCGA CCGGCCGCTA CACCGATATC
ATCAGCCGGT TGAAGCCGAA CGCGATGGTA TCAGGCGATA TCGTCGATCT CGACGGGCAT
GTCATCGGCC ACCACGAGGG TATCGTGCAT TTCACGGTGG GACAGCGCCG CGGGCTCGGC
ATCGCTTCCG GCGCGCCGCT TTACGTTCTC AGTCTCGATG CCGCGAACCG GCGCGTGGTG
GTGGGGCCGC GCGAGGCGCT CAAGATGCAT CGTATCGTCC TGCGCGACGT CAACTGGATC
GGCGATGGCG CGCTCGATCG CGCGATCGGC GCCGGGCTTG AGCTGTTCGT GCGGGTGCGC
TCGACTCGCA GACCCCAGCC GGCATGGCTG CGCGTCGTCG ACGGCCGCTA CGAGGTCGAA
CTCGTCGCCG GCGAGGAGGG CGTATCGCCC GGTCAGGCCT GTGTCTTCTA TGATGGGGCG
GAAGGGCAGT CTCGCGTGCT CGGCGGCGGA TTCATCGCGC GCGCCATGGC GCAGCGCGCC
AACGAAGCCG CGGCTCAGAG CGGCACGCTG GCACAATCTT TCGCCGCCGA GTTGCGCGGG
TAG
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| Protein sequence | MLNSLDLEGR PQDTRVVVAM SGGVDSSVTA ALLKSEGYDV VGITLQLYDH GAATHRKGAC
CAGQDIHDAR NVAARLGVPH YVLDYESRFR ETVIENFADS YASGETPVPC IECNRQVKFR
DLLATARELG AAALATGHYV SSRRLADGSR ALLCAADTDR DQSYFLFATT REQLDFLRFP
LGDMTKQQTR ELARRFGLSV ADKHDSQDIC FVPTGRYTDI ISRLKPNAMV SGDIVDLDGH
VIGHHEGIVH FTVGQRRGLG IASGAPLYVL SLDAANRRVV VGPREALKMH RIVLRDVNWI
GDGALDRAIG AGLELFVRVR STRRPQPAWL RVVDGRYEVE LVAGEEGVSP GQACVFYDGA
EGQSRVLGGG FIARAMAQRA NEAAAQSGTL AQSFAAELRG
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