Gene Nwi_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0560 
Symbol 
ID3676949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp629371 
End bp630198 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content59% 
IMG OID637712105 
Productcyclic nucleotide-binding 
Protein accessionYP_317179 
Protein GI75674758 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCCG TTGTGCTTCA CACCCATGGG GCAGGTGGCG GGTCTCTGCG GTTGGCGCGC 
TTTTTGCCGG GATATTGGAT AGAATTCAGT ATAACTTCCG CTGTCTTCCC TATAGATCGC
TACGCGTCTC CATCACGTCA GGAAATTGGC TGGATTGCCA TGGACATATC ACATTTAGCC
GAGCATCTCG GGACCGTCGG CGGCGTGGCC GCTTCGTTCT TCGTGGTCGC CACCTACACC
ATGCGGACCA TGATCCCGCT CCGTGTCTTC GGCATGCTGG CCAATCTCAT GCTGATGATC
ACGGCGCTTC CGCTTCACAA TTTCCTGCAG TTCGGGCTTC ATGCAGGATT GTTCTTCCTC
AACGGATATC GCCTGCACCA GATGCTCCTG CTCGTGCGCG AAGTGAAGAA GTCCGTCAAC
GGCGATCTCT CGATGGACTG GCTGAAGCCT TTCATGACCA AGCGCAAGTG CGAGGCCGGC
GAGATGCTGT TCTATAAGAA CGAGAAGGCG GAGACGATGT TCTACATCGT CAGCGGCCGC
TATCGTCTGG TCGAGTCCGG CATCGAACTG CCGATCGGGG CCCTCGTCGG GGAACTCGGC
ATGCTGTCGC CCAGCAACGA ACGCACCCAG TCGCTGGAGT GCATCGAAAG CGGCACGGTG
CTCAGCGTGA GCTATCGGCA GGTTGAGGAG CTTTACGTCC AGAATCCGGA GTTCGGCTTC
TATTTCCTGC GGCTGGCCAG CGCGCGGCTG TTTCAGAACA TCGGCAAGCT CGAAGATCGG
CTCGCCGAAA CCGCGGCGCC CCCGGCCATG AGTCCCAAGC TCGCATGA
 
Protein sequence
MWSVVLHTHG AGGGSLRLAR FLPGYWIEFS ITSAVFPIDR YASPSRQEIG WIAMDISHLA 
EHLGTVGGVA ASFFVVATYT MRTMIPLRVF GMLANLMLMI TALPLHNFLQ FGLHAGLFFL
NGYRLHQMLL LVREVKKSVN GDLSMDWLKP FMTKRKCEAG EMLFYKNEKA ETMFYIVSGR
YRLVESGIEL PIGALVGELG MLSPSNERTQ SLECIESGTV LSVSYRQVEE LYVQNPEFGF
YFLRLASARL FQNIGKLEDR LAETAAPPAM SPKLA