Gene Nwi_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0547 
Symbol 
ID3676891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp612965 
End bp613891 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content64% 
IMG OID637712092 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_317166 
Protein GI75674745 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATAC TGTTGACGGG TAGTAGCGGT CAGGTCGGCG GAGCGCTGCG TCCGCTGCTG 
AAGGAAGGCG GCATGGTCAT CGCGCCGTCG CGCAGCGCGT TCGACCTGTC GAATCCCGAA
ACGCTCGCCG GGGCGCTCGA CCGATTCAAA CCCGATCTCA TCATCAATCC CGCGGCCTAT
ACCGCGGTGG ATCGCGCGGA AGACGAGCGT GAACTCGCTT TCCTCGTCAA CGCCAAAGCA
CCCGCTGCGA TCGCGGAATG GTCGGCACGG CATCGTGTGC CGTTGATTCA TTTCTCCACC
GACTACGTCT TCGATGGCTC TGGCGACAAG CCGTGGCGTG AGGACAGTCC CACGGGTCCT
CTCTCGGTCT ATGGCGCCAG CAAGCTCGCC GGCGATCTCG CCATCGAGGC GGCCGGCGGG
CCGCATCTGA TCGCGCGCAC CTCGTGGGTC TATGCCGCGA GCGGAGCCAA TTTCCTGCGC
ACGATCGCGC GGCTGGCCGG CGAACGCAAG GAGTTGCGCA TTGTCGCCGA TCAGACAGGC
GCTCCGACCA CGGCAAACAC GATCGCCGAT GCCGTGTCTC GCATCGTGCT CTCGAATGCA
TCGGATTTGA GCGCGTTGTT CGCGCGCAGC GGCGGCGTGG TCAATCTCGC CTGTGCGGGC
GAAACCAGTT GGCACGGCTT CGCCACCGCC ATTGTCGGCG GATTGAAGTC GCGCGGTGCG
GGACTGTCTG TGGAGACGAT CATCCCGATC GCGACGGCGG ATTTTCCGAC CAGGGCAAGG
CGGCCTGGCA ATTCCAGGCT CGACCTGTCG CAACTCCGAG AACGTTTCGG ATTAACTCCG
CCAACGTGGC AGGACGCGCT GTCGACGGAA CTTGATCGCC TCGTCACCGG GCAGGACGAA
CAGGCGGTCC CCGCAATGCG AGCATGA
 
Protein sequence
MRILLTGSSG QVGGALRPLL KEGGMVIAPS RSAFDLSNPE TLAGALDRFK PDLIINPAAY 
TAVDRAEDER ELAFLVNAKA PAAIAEWSAR HRVPLIHFST DYVFDGSGDK PWREDSPTGP
LSVYGASKLA GDLAIEAAGG PHLIARTSWV YAASGANFLR TIARLAGERK ELRIVADQTG
APTTANTIAD AVSRIVLSNA SDLSALFARS GGVVNLACAG ETSWHGFATA IVGGLKSRGA
GLSVETIIPI ATADFPTRAR RPGNSRLDLS QLRERFGLTP PTWQDALSTE LDRLVTGQDE
QAVPAMRA