Gene Nwi_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0544 
Symbol 
ID3676888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp610326 
End bp611393 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content60% 
IMG OID637712089 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_317163 
Protein GI75674742 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.831105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCA AGGCTTCGAC CATTTTCGTC ACAGGCGGCG CGGGATTCAT CGGCTCGGCG 
GTGGTTCGTC ACCTCTTGCA CGATACTCAC GCTCGCGTGG TCAACATCGA CAAATGCACC
TACGCGGCGA ACCTCGATTC ATTACCCGGC ACGAACGAAA ACCTGAACTA TGCCTTCGAA
AAGCAGTGCA TCTGCGACAG CGCCGGGCTG CGCCATCTGT TCGAGAAATA TCGGCCGGAC
GCCGTCATGA ACCTCGCCGC CGAGAGTCAT GTCGACCGCT CCATCGACGG CCCCGGTGAA
TTTATCCAGA CCAACATTGT CGGCACCTTC ACTCTGCTGC AGGAAACCTT GCGTCACTGG
CGCTCGCTCT CGCCCGAGAA GCGGGAGAAG TTCCGCTTCC TGCACGTCTC GACCGACGAG
GTCTTCGGTT CGCTCGGCGA TAGCGGTTAT TTCACCGAGG CCACCGCCTA CGCGCCAAAC
TCGCCTTATT CGGCGAGCAA GGCATCCTCC GACCATCTGG TTCGCGCCTG GCGCGAAACC
TATGAGCTGC CGACGCTGAT CACCAATTGC TCGAACAACT ACGGGCCCTA TCACTTTCCG
GAAAAGCTGA TCCCCCACAT GATCATCAAG GGTCTCGCGT GCGAGCCGCT GCCTGTCTAT
GGCGACGGCA GGAATATCCG GGACTGGCTC TATGTCGATG ATCACGCAAG AGCGCTGTCG
CTGGTTCTGG AACACGGCGC TGTTGGTCAC ACCTACAATG TCGGCGGGCG TAACGAGCGA
ACAAACCTGC ATGTGGTCGA GAGCATCTGT GATCTGCTCG ACGAGATCGC CCCGAACACG
ACCAACCGGC ATCGCGATCT CATCACCTTC GTCACTGACC GTCCCGGTCA CGATCGACGC
TACGCCATCG ACGCGTCCAA GCTCGAACGC GAGCTGGGCT GGCGGGCGAA AGAGGATTTC
GAGAGCGGCA TCGAGAAAAC CGTCCGGTGG TATGTCGACG AGCAGCCGTG GTGGCAGGCG
ATCCTGGCGA GAGGCTACGC GGCCAGGCGC GTGGGACTGA GGCAATAG
 
Protein sequence
MRFKASTIFV TGGAGFIGSA VVRHLLHDTH ARVVNIDKCT YAANLDSLPG TNENLNYAFE 
KQCICDSAGL RHLFEKYRPD AVMNLAAESH VDRSIDGPGE FIQTNIVGTF TLLQETLRHW
RSLSPEKREK FRFLHVSTDE VFGSLGDSGY FTEATAYAPN SPYSASKASS DHLVRAWRET
YELPTLITNC SNNYGPYHFP EKLIPHMIIK GLACEPLPVY GDGRNIRDWL YVDDHARALS
LVLEHGAVGH TYNVGGRNER TNLHVVESIC DLLDEIAPNT TNRHRDLITF VTDRPGHDRR
YAIDASKLER ELGWRAKEDF ESGIEKTVRW YVDEQPWWQA ILARGYAARR VGLRQ