Gene Nwi_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0543 
Symbol 
ID3676887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp608966 
End bp610267 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content61% 
IMG OID637712088 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_317162 
Protein GI75674741 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.873021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG TGATGATCGG CGCCGGCTAT GTCGGCCTGG TGTCGGCAGC CTGCTTTGCT 
GATTTCGGAC ATGACGTGAC ATGCGTCGAC AAGGATTGCG AGAAGATCGC GGCACTCAAT
CAATACAGGA TCCCGATTTT CGAACCCGAT CTCGACAAAC TCGTCGAGTC CGGCGTCAAT
TCTGGCCGGT TGAGATTCGG AGTGGATCTC TCCGACATCG GCGAAGCCGA CGCCGTATTC
ATCGCGGTCG GAACGCCGTC ACGCCGCGGC GACGGTCACG CCGATCTGAG CTACGTGCAT
GCCGCGGCTC GCGAGATCGC TGGTTTGCTG GAGGGCTTCA CCCTCATCGT CACCAAATCG
ACGGTTCCCG TCGGAACCGG CGACGAGGTG GAGCGAATCA TTAAAGAGAC TAATCCGGAA
GCCGACTTCG CCGTTGTTGC AAACCCCGAA TTCCTGCGGG AGGGCGCTGC GATCCGCGAC
TTTCAGCATC CGGATCGCAT CGTGGTCGGA ACCGATGACG AGCGCGCGAA GAAAGTGATG
GGTCAGATCT ACCGTCCCCT CTATCTCAAC CAGGCACCCA TCCTCTATAC CAGCCGACGC
ACCGCCGAAC TGATCAAGTA CGCGGCCAAC GCCTTTCTCG CGACCAAGAT CACCTTCATC
AACGAGATCG CGGATCTCGC GGAACGCGTC GGCGCCAACG TGCAGGACGT CGCGCGCGGC
ATCGGGCTCG ACAATCGCAT CGGCGCCAAG TTTCTTCATG CCGGTCCAGG CTATGGCGGC
TCCTGCTTTC CAAAGGACAC CCGCGCGCTG TCGAAGACCG CGCTCGACTA TGGCGTGCAG
CTCCGCGTCG TCGAGGCGAC CCTGACCGTG AACGAGATCC GCAAGCGCAC CATGTCGCGA
AAGGTCTCTG GCGCGCTGGA CAACGACATT CGCGGCAAGA CCATCGCCGT GCTCGGCCTG
ACCTTCAAAC CCGACACCGA TGACATGCGT GAAGCGCCGT CGATCGCACT GATTGCCGGC
CTGCTCGATT TCGGCGCCAA GGTGAGAGCA CACGATCCCG TCGGCATGGA GCAGGCGAAG
AAGGAACTCT CCGATATTGA GTTTTGCGAC GATCCTTACG CCTGCGCCCG CGGCGCCGAC
GCGCTGGTGA TCGTGACCGA GTGGCGACAG TTCCGCGCGC TGGACCTCGA GCGGATCCGA
ACAGACATGG CCACGCCTGT TATCGTGGAT CTGCGAAACA TCTACAGGCC GGAAGACGTG
CGGTCAGCGG GGTTCAGGTA TGAGAGCATC GGTAGAGCCT AG
 
Protein sequence
MRIVMIGAGY VGLVSAACFA DFGHDVTCVD KDCEKIAALN QYRIPIFEPD LDKLVESGVN 
SGRLRFGVDL SDIGEADAVF IAVGTPSRRG DGHADLSYVH AAAREIAGLL EGFTLIVTKS
TVPVGTGDEV ERIIKETNPE ADFAVVANPE FLREGAAIRD FQHPDRIVVG TDDERAKKVM
GQIYRPLYLN QAPILYTSRR TAELIKYAAN AFLATKITFI NEIADLAERV GANVQDVARG
IGLDNRIGAK FLHAGPGYGG SCFPKDTRAL SKTALDYGVQ LRVVEATLTV NEIRKRTMSR
KVSGALDNDI RGKTIAVLGL TFKPDTDDMR EAPSIALIAG LLDFGAKVRA HDPVGMEQAK
KELSDIEFCD DPYACARGAD ALVIVTEWRQ FRALDLERIR TDMATPVIVD LRNIYRPEDV
RSAGFRYESI GRA