Gene Nwi_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0539 
Symbol 
ID3676947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp604413 
End bp605336 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content53% 
IMG OID637712084 
Productglycosyl transferase family protein 
Protein accessionYP_317158 
Protein GI75674737 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.534013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCCA GCGTCGTCAT CGCTTGTTAC AAGCATGAAG CGTACATCGA AGAGTGCCTG 
GAGACGATCT ATCGGCAAAC CTTCTCCGAC GTCGAGCTCA TTATCGTCGA CGATCACTCC
CCGGACAGGA GTTTCGAGAT CGCACAGAAG ATTCTCAAAC AAAGATCCTT TGCCAAGCGA
TTCGTATCCT GCTCGCTTCT GAAGAATCCT CTCAACCTCG GAGCGCCCTG CACCTGGAAC
AGGGCGCTGT CGCTTGCCAA GGGAGAAATG ATCTTCTTCC TGAATTCGGA CGATAAATTC
TCAAAGGATC GCATCCGGAT ATTTGCGAAC CAGTATGAGA GAGAGAAGCT GTTCTTTGGC
TTTTCGGCAG TCGAGCCGAT CGATGAAAGC GGCAAGCCCG TCACGACTCA CCAGTTTCCG
ACGAGGCTTC GATACGCCAT CGATCGCAGC CGGATAACGG GCTCTCCGTT ATCCTGGATA
TTCCTGGATT CACAGGTCGC CGCCTCAAGC GGAAACTTCG TCATGAGCAG AGATCTGCTC
AGAAAAATCG GGTTGCTATC CGACCTGAAA TACTGCCACG ACTGGGAGTT TGCACTACGC
GCCGTAACGG TGGTGGAACC GAAGTACGTT GATTCGGATC GCTATATGTA TCGGCTCCAT
TCGACGAACA GCTTCCGCAG CCTGAGCAAC GTGGCCGAGC GCGAGACAAA GGCCTGCATG
TCGTCGTACT GCGTCAACGC GATAGCTCAA CGGCCGGTCA ACAGGGTTTG CCTCAGCCCC
ATAAACTTCG GAGACGCCTT CTACAACCTC ATCAAGCTTC ATCCGAACTT CTGTTATTGG
GTGAAGCAGT TGTATGCTCC CTACCATCCA GACCATCGGA CCGTTGACTG GAACGAGTGG
ACCATGCCGC TCATGTGGCG ATGA
 
Protein sequence
MLASVVIACY KHEAYIEECL ETIYRQTFSD VELIIVDDHS PDRSFEIAQK ILKQRSFAKR 
FVSCSLLKNP LNLGAPCTWN RALSLAKGEM IFFLNSDDKF SKDRIRIFAN QYEREKLFFG
FSAVEPIDES GKPVTTHQFP TRLRYAIDRS RITGSPLSWI FLDSQVAASS GNFVMSRDLL
RKIGLLSDLK YCHDWEFALR AVTVVEPKYV DSDRYMYRLH STNSFRSLSN VAERETKACM
SSYCVNAIAQ RPVNRVCLSP INFGDAFYNL IKLHPNFCYW VKQLYAPYHP DHRTVDWNEW
TMPLMWR