| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0536 |
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| Symbol | |
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| ID | 3676944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 598641 |
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| End bp | 599987 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637712081 |
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| Product | type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_317155 |
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| Protein GI | 75674734 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.544643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.538846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTCCTA GCCAGGCCTC GCTCGCGACC GTTCGCCAGT TCCAGTCGGA GACCGACGCA
ATCCGGGAGG CGGCGGAGCC GCTGGTCGCG CGCGTCACCC TGTTCGTATT GTCCGCATTC
CTGGTTTCGA TCGTCGCAAT TCTGTGTCTG ACGCAGGTCG ATCGCGTCAT CACCAGCTTG
AGCGGAAATA TCGTCCCTGT CGGTCATGTC AATGTCTTGC AGGCGCTCGA TCCATCGATC
ATCAAGACGA TCGACGTGCG CGAGGGCGAG CAGGTGAAGA CCGGGCAGTT GCTCGCGACG
CTCGATGCCA CTTTCACCTC GGCGGATCTG ACGCAGGCGA AGTTGCAGAT CGCGAGCCTG
GAAGCGCAGG CGGCGCGCGA TGAGGCGGAG TTGAAACAGC AGCCGCTGGT GTTTCCTGAT
AATCCGGATT CCGACTTCCA GAAGTACGCC GCTTTGCAGA AGGCGCTCTA TGAACAGCGC
GTGGCTCAGT ATCAGGCCCA GATCAACAGC TTCGAATCAA AGATCAGGGA AACCAAGGCG
ACGATCGAGA AACTTCGCGC TGATGATACC CGCTATCGGC AGCGCGAGGA GATCATGGCG
AAGATCGAGC AGATGCGCAC GACGCTTGCC GAGCGCGGCA CCGGATCCCA GCTCAACATG
TACATCTCCC AGGACGCCAG GCTGGAGTTG CTGCGGACGC TGGAGAATGC GCACAACGGC
CTGATCGAGG CGCAGAACAC ACTCGGATCG ATCACCGCCG ATCGCGATGC ATTCAAGCAG
CAGTGGTTCG CGCAACTGAG CCAGGACCTG GTGACGACGC GCAACAAGCT GGATGAAGCG
CGGGCAACTT ATGAGAAAGC TTTCAAGCAC CAGGATCTCG TGCGCTGGAC GGCTGCCGAA
CCATCCGTGG TGCTGACAAT GGCCAAGCTT TCGGTCGGAT CAGTGCTCAA ACCGGGCGAT
CCCTTCATTA CGCTCATGCC GATCGACACC AAGCTTGAAG CGGAAATCAG GATCTCCTCG
CGGGATGTGG GATTCATCCG GGCAGGCGAC CCCTGCGTGA TGAAGATCGA TGCTTTCAAC
GCGGCGGAGC ATGGCACGGC GCATGGCAAG GTGCGCTGGA TCAGCGAGGG CACATTCACG
ACCGACGATG ACGGCAAGCC GGTCGATGCC TATTACAAGG CGAGATGCTC GGTGGACGCG
TCCGCCTTCA AGGGCGTGCC GAGCAATTTT CGTCTCATTC CCGGCATGAC CCTGCAAGGA
GATATCAACG TCGGGACCCG TTCTGTGGCG ATGTATCTGC TCGGCGGAAT GCTGAAAGGC
ATGAGCGAGG CCATGCGGGA GCCATGA
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| Protein sequence | MSPSQASLAT VRQFQSETDA IREAAEPLVA RVTLFVLSAF LVSIVAILCL TQVDRVITSL
SGNIVPVGHV NVLQALDPSI IKTIDVREGE QVKTGQLLAT LDATFTSADL TQAKLQIASL
EAQAARDEAE LKQQPLVFPD NPDSDFQKYA ALQKALYEQR VAQYQAQINS FESKIRETKA
TIEKLRADDT RYRQREEIMA KIEQMRTTLA ERGTGSQLNM YISQDARLEL LRTLENAHNG
LIEAQNTLGS ITADRDAFKQ QWFAQLSQDL VTTRNKLDEA RATYEKAFKH QDLVRWTAAE
PSVVLTMAKL SVGSVLKPGD PFITLMPIDT KLEAEIRISS RDVGFIRAGD PCVMKIDAFN
AAEHGTAHGK VRWISEGTFT TDDDGKPVDA YYKARCSVDA SAFKGVPSNF RLIPGMTLQG
DINVGTRSVA MYLLGGMLKG MSEAMREP
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