Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0535 |
Symbol | |
ID | 3676943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 596417 |
End bp | 598651 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637712080 |
Product | ABC transporter, transmembrane region |
Protein accession | YP_317154 |
Protein GI | 75674733 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.622763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGCGC CAGCCGTCGC CGAGGATGCC GATATCGATC CCATGCCGCC GTCCGGCCTC GAATGCCTGG TCATCATCGC CCGGCAGCAC GGACTTGATC TCACTTCGAC ACAACTCACC AAGGATAATC TTCTTGCCGA AAGGGAAGTG TCTCCGGGCC AGTTGGTCCG CTGCGCCGAG AACGCCGGCA TGCGGTCGAA GCACGTCAAT CTGGATTGGG ACGGGCTGTC CCATCTGAAA AAGGCGCTTC CGGCCATTGT CGGCCTCCGC AACGGAAGCT TCATGGTGTT GCTGGCCGTG GAGGGAGACG CCAACAATAC CCGCATCGCG CTGAGGGATC CGAACGCCGC GGAAGACGCG CTGCTGGTGA TCGACAGGCT TCGCTTCGAA GACATCTGGT CCGGGGATGT CATTCTGGCA AAGCGCAACT ATGAGATTTC CGACGAGTCG CAGCCCTTCA GTTTCGGTCT CGTCGCGGCG TTGCTGTTTC GCGAGCGCCG TATCGTACGG GATGTCGCCA TCGCCGCGCT GGTGCTGGGC TTCCTCGGTC TCGCGCCCAT CATGTTCTGG CGCCTGCTGT CGGACAAGGT GATCTTCTAT CACGCGTTCA ACACCTTCTA TGTGCTTTGT CTGGCGATGC TGGTCATCAT CGCGTTCGAG GCCGTCTTCG CCTTCCTCAG GCAAGTCCTC GTTCACCGGC TGACGACCAG GCTTGACGTC AAGCTGTCCA CCTACGTGTT TGAGAAAGTC CTCAATCTTC CGATCGATTA TTTCGAGCAG ACCGCCGTCG GCCTGGTGGC GCGCGACATC CATGAAGTCT ATCGCATCCG CTCGTTCCTG ATGGGTCAGC TGTTCGGCAC GATACTGGAT TCGACGACGC TGATCTTCTT CCTGCCTGTC ATGTTCTTCT TCAGTCCGAT CATGACGCTA ATTGTTCTGA CGATATCGGC AATGATCGTC GGATGGCTCA TGCTGATGCT GCCGACCTAC CGCAAGGTGT CGAATGCCGT TCTGGTCGCC GAAGGCGCGC AGGGCGCGTT TCTGGTTCAA ACGCTCAACG GCATCCGAAC GGTGAAGTCG CTCGCGCTCG ACGCGCGGCA ACGCCATATG TGGGATGTGC TGGTTGCGCG CGTGGCCAAG GCGCGGCTTG CGGAAGGAAT GACCGGAAAC GCGATCCAGG CGGTGGTGCG CCCCTTGGAG CGACTGGCGG TGAGCGGTTC CTATGCAGTC GGCGTTTATC TCGCGCTTGT AAACAGTGAT CCCGTCTATA TCGGAGCGCT GTTTGCCTTC CTGATGCTGT CGCAGCGCGT ATCGGGCCCG CTGATGCAGA TCGCGCAGTT GATCAATCAA TACGACGAGG CGCGTAGCGC GGTGGCTACG GTCAGCAAGC TGGTGAACCA GCCGGCCGAG GAGGGCCGTG CCGGCCACGG CGTTCGCTCG CCGATTGAAG GCAAGGTGGA GTTCTCTAAC GTTACCTTCC GGTACAAGGG GGCGGTTTCG CCTTCGCTGA ACGGTATTTC CTTTGAAGCG ACGCCCGGAG CCACGCTCGG TGTGATGGGC AAGAGCGGTT CGGGGAAGAC CACGATCACG CGACTCCTGC AACGATTGCA TTCGGACTAT GACGGACTGA TCAAGATCGA CGGCATCGAT GTTCGCGAGT ACGACATCGA TCACCTGCGC AGGAATGTCG GCATCGTGCT TCAGGAGAAC TTTCTCTTCA GCGGCACGAT TCGGGAGAAT ATCTGCGCGG CCACTCCCGA CGCCACCTTT GACGATATCG TCAAGGCGGC GCGGCTGGCC GGCGCGGAGG AGTTCATCGA CAAGCTGCCG CGCGGCTACG AAACCTATGT CTACGAAGGA TCGCCCAATC TTTCAGGAGG GCAGCGGCAG CGGTTGGCGA TCGCCCGCGC GCTGATCGTC GATCCTCCGA TTCTGATCCT CGACGAGGCC ACGAGCGCGC TCGACGCCGA CAGCGAAGCC ATCGTGAATG CCAACATCGC GCGGATCGCA AGCGGCCGGA CGCTGATCGT CATTTCGCAT CGCCTGTCGT CGCTGACGAC CGCCGATGCC ATCCTTGTGC TCGATCGTGG CGTGGTCAAC GATATCGGGC GTCATGAGGA ACTGCTGGCG CGGAACGATA TCTACAGTTC GCTCTGGTAC CAGCAGAATA CGCATCTCGC GCCGGCGGTC CGCAACGATA AGCCGAAACT CCGGAGTCCG ACCCTTGTCT CCTAG
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Protein sequence | MVAPAVAEDA DIDPMPPSGL ECLVIIARQH GLDLTSTQLT KDNLLAEREV SPGQLVRCAE NAGMRSKHVN LDWDGLSHLK KALPAIVGLR NGSFMVLLAV EGDANNTRIA LRDPNAAEDA LLVIDRLRFE DIWSGDVILA KRNYEISDES QPFSFGLVAA LLFRERRIVR DVAIAALVLG FLGLAPIMFW RLLSDKVIFY HAFNTFYVLC LAMLVIIAFE AVFAFLRQVL VHRLTTRLDV KLSTYVFEKV LNLPIDYFEQ TAVGLVARDI HEVYRIRSFL MGQLFGTILD STTLIFFLPV MFFFSPIMTL IVLTISAMIV GWLMLMLPTY RKVSNAVLVA EGAQGAFLVQ TLNGIRTVKS LALDARQRHM WDVLVARVAK ARLAEGMTGN AIQAVVRPLE RLAVSGSYAV GVYLALVNSD PVYIGALFAF LMLSQRVSGP LMQIAQLINQ YDEARSAVAT VSKLVNQPAE EGRAGHGVRS PIEGKVEFSN VTFRYKGAVS PSLNGISFEA TPGATLGVMG KSGSGKTTIT RLLQRLHSDY DGLIKIDGID VREYDIDHLR RNVGIVLQEN FLFSGTIREN ICAATPDATF DDIVKAARLA GAEEFIDKLP RGYETYVYEG SPNLSGGQRQ RLAIARALIV DPPILILDEA TSALDADSEA IVNANIARIA SGRTLIVISH RLSSLTTADA ILVLDRGVVN DIGRHEELLA RNDIYSSLWY QQNTHLAPAV RNDKPKLRSP TLVS
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