Gene Nwi_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0505 
Symbol 
ID3675506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp562171 
End bp563424 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content66% 
IMG OID637712049 
ProductSignal transduction histidine kinase 
Protein accessionYP_317124 
Protein GI75674703 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.611545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCGCG TCGCGCTCAT TCTGCTGGTT GCCGGACTTG CATTGGCCGC GCTGGTTGTG 
TTCGGCGGCT TGCAACCTCT GGGCGCCACC GTCGCTTTCG CCTGCATCGC CGGCGCGGCG
CTGGTGCCCT GGCAGGTTCA TGATCCGGAT GCGTCGCGTG AAATCGAGTT CGGAGCCAAC
CCGGTAGAGA CGGATGTGGC GCGTGCTCTC GTGGCCGGCA TGCCGGATCC CAATGTGCTG
CTTGATAGGG CCGGCCGCGT CATCCATCTC AATGCTGCGG CGGCGCAACT CGTACCGGCG
CTGCGCCGGA ATGAACTCGC GCAGTTCGCG CTGCGGGCGC CTGAGATCGT CACCGCGTTG
CGAGAGGCGA TTGCGACCAG GGAGGCTCGG CGGGCGACCT ATCTCAATCA TGTTCCGGTC
GATCGGTGGA TGGAATTGAT CATCACGCCG ATTCCGGTGC CGACCGCATT CGGTGGTGTC
GACTATTGCA TGCTTTTGAC GTTTCACGAT CAGACGCCGT TGCGCCGGGT CGAGGAAATG
CGCGCCGATT TCGTCGCCAA TGCGAGCCAC GAGTTGCGCA CGCCGCTCGC GGCGCTGTCA
GGATTCATCG ACACTCTCCA GGGGCCCGCG CGCGAGGACG CCCGCGCCCG CGAGCGGTTT
CTCGGCATCA TGCATGCGCA GGCGGCGCGG ATGGCGCGGC TGATCGACGA TCTCCTGTCG
CTGTCGCGGG TCGAGCTATC GGTGCATGTG CGCCCGGAGA CGATCGTCGA CATTGTTCCG
ATCGTGCGCG AGGTCGTCGA CGGACTTGAG CCGCTTGCGG CGGAACGTCA CGTCGAGATC
GAGACCGCAT TGCCGGAAAC CCCGGTGCTG ATCTGCGGCG ACCGTGAGGA ATTGCTGCGA
TTGTTCGAGA ACCTGATCGA GAACGCGCTG AAATACGGCG CGTCCGGTGG CCGGGTCATG
GTGTCGTCGA TGCTCGACGT CTCGTCGGAG GGGAACCCGG AATTCCGGGT GGTGGTGCGG
GATTTCGGTC CCGGCATCGC ACCTGAGCAT CTGCCCCGCC TGACCGAACG CTTCTATCGG
GTCGACGCCG GCGACAGCCG GGCTCAGGGC GGCACAGGCC TCGGCCTGTC GCTGGTGAAG
CATATCCTCA ACCGGCATCG CGGCCGTCTG CTGATCGAGA GCGTGCCCGG CCAGGGCGCG
AGCTTTACCG CCGGCTTCCC ACCGGCGCGG GACGTGCCGG AGGCAAGAAG CTGA
 
Protein sequence
MRRVALILLV AGLALAALVV FGGLQPLGAT VAFACIAGAA LVPWQVHDPD ASREIEFGAN 
PVETDVARAL VAGMPDPNVL LDRAGRVIHL NAAAAQLVPA LRRNELAQFA LRAPEIVTAL
REAIATREAR RATYLNHVPV DRWMELIITP IPVPTAFGGV DYCMLLTFHD QTPLRRVEEM
RADFVANASH ELRTPLAALS GFIDTLQGPA REDARARERF LGIMHAQAAR MARLIDDLLS
LSRVELSVHV RPETIVDIVP IVREVVDGLE PLAAERHVEI ETALPETPVL ICGDREELLR
LFENLIENAL KYGASGGRVM VSSMLDVSSE GNPEFRVVVR DFGPGIAPEH LPRLTERFYR
VDAGDSRAQG GTGLGLSLVK HILNRHRGRL LIESVPGQGA SFTAGFPPAR DVPEARS