Gene Nwi_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0502 
Symbol 
ID3675503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp559187 
End bp560578 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content63% 
IMG OID637712046 
ProductOmpA/MotB 
Protein accessionYP_317121 
Protein GI75674700 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.605644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGTT TTTTCAGATG GAGCAGCAAG TGGTGGCCGG GTGTCATCCC GCTCACGGTA 
CTGTGGGTGC TGGCAGCCTG GACGACGACG GCTCCGCTGG AAGCCGATCT GAGCGAGCAG
ACCGCGGTCG CGCTCAAGGA CAGCGTTCTC GATAAGACCG CCATCAGCGC GGCCGGACGC
GACATCACGT TCTCCGCCGA TGCGTTCTCA GAGCAGGAAC GCAGCAATGC GGTGGCCTCG
GTGGAGACCG TTCCGGGCGT GCGACGGGTC AACGATCGCA CCGCGCTCGT CGCCGAAGCC
AAACCGTTCG TGTGGACCAT CGAACGTGGG GTCGGAAGGG TGACGCTCGG CGGAAGCGCG
CCGTTGCCCG TGGTCAGGAA CAAGCTGCTG GATGCGGCGC GTGCGAGGTT TGCCGGCGTC
GACATCGCCG ATCGCATGGA TTTGAAGCGC GGCGCGCCGC CGCGGTTCGA AGCCGCGGCG
ATATTGCTGA TCGGCGAGAC GAGCAAGCTG AAGAACGGCA AGGCAACGAT TTCGGACCTG
ACGGTCAATC TGTCGGGCAT GGCGCGTGAA CTGGGTGGAC GCGAGGCGAT CGCCGCGGCG
CTGAAGAACC TGCCCGAGGG ATACTCGGTC GCCGACGATA TCCAGGCCCC GCCATACGTC
TTCGAGGCCA ACAAGGATCC GGTCTCCGGG GTGCTGACAT TGACCGGATA TGTGCCCGAT
AACGCGGTTC ATGCGGCGAT CGTCGCATCG GCGGGCCGCA AGTTCGGCGA GAAGATCGTT
GATAAGCTCA AGGCGAGTCT CGGTGCGCCG GCAGGCTTCG ACGCCGTCGT CACGCGGGCG
CTGCGTTCGT TGTCGCGCCT GTCGACAGGA AGACTGGTCG TCTCCGATCG GAATGTCGAA
CTCTCCGGCG ACGCGCTATA CGACCTGGCC GGAAAACAGA TCCGTGCTGA CCTGCCCAAG
GATCTTCCGC GCGGCTGGGA GACGAAAACG GACGTTTCAA TCAAGCCGTC GGCGTCCCCG
GTCGATCCGA CGGTTTGCCA GCAACTGTTC GGCGAGCTTC TTGAAAAGCG CACCATCCAG
TTCGAAGCCG GTCAGGCGAC TTTGCACCTC GATTCGATCG GCCTGCTGGA TCAATTGACG
GAAACCGCGC TCCGTTGCCA GACGGCCACC ATCGAGATCG TGGGTCACAC CGATAGCGAC
GGCGACGCTT CGTTCAACCA GACACTGTCC GAGCGACGCG CGCAGGCGGT GGTGGATTTT
CTCGTGAAAG CCGGATTGCC CGCCAATCGG TTCACGCCGA TGGGGCGGGG CAGCGCTCAG
CCGATCGCCA CCAACGACAC CGACGAGGGC AAAGCGAAAA ACCGACGCAT TGATTTCATT
GTGAGGCAGT AG
 
Protein sequence
MRGFFRWSSK WWPGVIPLTV LWVLAAWTTT APLEADLSEQ TAVALKDSVL DKTAISAAGR 
DITFSADAFS EQERSNAVAS VETVPGVRRV NDRTALVAEA KPFVWTIERG VGRVTLGGSA
PLPVVRNKLL DAARARFAGV DIADRMDLKR GAPPRFEAAA ILLIGETSKL KNGKATISDL
TVNLSGMARE LGGREAIAAA LKNLPEGYSV ADDIQAPPYV FEANKDPVSG VLTLTGYVPD
NAVHAAIVAS AGRKFGEKIV DKLKASLGAP AGFDAVVTRA LRSLSRLSTG RLVVSDRNVE
LSGDALYDLA GKQIRADLPK DLPRGWETKT DVSIKPSASP VDPTVCQQLF GELLEKRTIQ
FEAGQATLHL DSIGLLDQLT ETALRCQTAT IEIVGHTDSD GDASFNQTLS ERRAQAVVDF
LVKAGLPANR FTPMGRGSAQ PIATNDTDEG KAKNRRIDFI VRQ