Gene Nwi_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0472 
Symbol 
ID3676504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp529085 
End bp529831 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content68% 
IMG OID637712014 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_317091 
Protein GI75674670 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.850849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTTC TCGTCACACG GCCTGAACCG GACAATGAAA CCACGGCGTC GGCGCTGCGT 
GCGATGGGGC GCGAGGCGTT GTTGTCACCG GTGTTGCGCT TCGAGGCGGC TGCTTTCGAA
ATCGACCGGG GCGCGAATTA TGGCGCGGTC ATTGTCACCA GCGCCAACGC GCTGCGCGCG
CTCGCCGTCC ATCCGGGGAT TGAATCGCTG CTGAAGCTGG CCGTGTTCGC GGTCGGCCGT
CACACCGCCG AGGCCGCGCG CCGGGTCGGC TTCCAGGATG TGGTGGCGGC GGCCGGAGAC
GCCGCGGCAT TGTGCGAACT CATCGTGAAG CGTGTCCGCG CGAAATCCCT GCCGAAGGGC
GCCAGGATTC TCTATCTCGC CGCGGCTGAC CGCTCATGCG ATCTCGCGGG GAAGCTCGAA
GGGCACGGTT TGGCCGTCGT GACGACGACA TGTTACCGGA TGGCGCCGGT GGCGAGCCTG
TCCCGCGAGG TCTGTGACGC GTTCGCCGCG CACCGGATAT CAGCGGTGCT GCATTATTCG
CGCCGCAGCG CCCGTGCGTT CCTGGATGCC GTCCGGATCG GGGGCGTCGA GATATCGGCC
CTGGCGGTCC CGCAATGTTG CATCTCGGGC GCGGTCGCCT CCGTTCTGCG GGATGCAGGC
GCGCCCCATG TGGTGGAGGC GAGCGCCCCG GCGGAGGAAG CTGTCCTGGA GGCGTTGGAT
TGTGCGTTGC GGCCGGCGTC GCAGTAA
 
Protein sequence
MAVLVTRPEP DNETTASALR AMGREALLSP VLRFEAAAFE IDRGANYGAV IVTSANALRA 
LAVHPGIESL LKLAVFAVGR HTAEAARRVG FQDVVAAAGD AAALCELIVK RVRAKSLPKG
ARILYLAAAD RSCDLAGKLE GHGLAVVTTT CYRMAPVASL SREVCDAFAA HRISAVLHYS
RRSARAFLDA VRIGGVEISA LAVPQCCISG AVASVLRDAG APHVVEASAP AEEAVLEALD
CALRPASQ