Gene Nwi_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0447 
Symbol 
ID3676622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp503329 
End bp503811 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID637711988 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_317066 
Protein GI75674645 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.399021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.903772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTCG TCGTCATTGC CGTGGGGCGT CTGAAGCAGG GGCCTGAGCG GGAGCTTGCC 
GATCGCTATC GCGGACGCTT CGCGGATATC GGGCGCAATC TTGGCTTTCG CGGCCTGGAT
GTCCATGAAG TCGCGGAAAG CCGCGCCCGC GATGCCGGGC AGCGCATTCG GGAAGAGGCG
GCGGCCGTCC TTGCGCTGGC ACCCAAGGAG ATGATCCTGG TGGCGCTGGA CGAAAAAGGC
AAAAGTATCG ACAGCGCCGC ATTTGCGGAA CATCTGGGCC GCTGGAGGGA TGAGTCGGTG
GCGGACGCGG TTTTCATGAT CGGTGGCGCG GACGGACTTT CGCCTGAATT ACGGCGCAGG
GCTAGATTGA GCGTTGCATT CGGCGCGGCC ACATGGCCGC ATCAGATGGT GCGCGTCATG
CTGCTTGAGC AGATCTATCG GGCCGCGACC ATTCTGGCCG GTCATCCTTA TCACCGTGGT
TAG
 
Protein sequence
MRLVVIAVGR LKQGPERELA DRYRGRFADI GRNLGFRGLD VHEVAESRAR DAGQRIREEA 
AAVLALAPKE MILVALDEKG KSIDSAAFAE HLGRWRDESV ADAVFMIGGA DGLSPELRRR
ARLSVAFGAA TWPHQMVRVM LLEQIYRAAT ILAGHPYHRG