Gene Nwi_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0429 
Symbol 
ID3676603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp484429 
End bp484989 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content61% 
IMG OID637711969 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_317048 
Protein GI229125527 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.675771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCTG TAGATCCCTC GGTTTCTGGT GTGTCCGGCC GTTATGCGAC GGCCCTGTTC 
GAACTCGCGC GTGAAGACAA ATCGATCGAC GCCGTCAAGG CCGACCTCGA CAAGTTCGAT
GCGATGCTGG CGGAGAGCCC TGAACTGGTG CGCCTGGTGC GCAGTCCGGT TTTCAGCGCC
GATACGCAAA GCAAGGCGCT CGCCGCCGTG CTGAGCAAGG CCGGGATCGG TGGCACGACC
GCAAACTTCC TGAAAGTCCT GGCAGCCAAC CGCCGTCTGT TCGCGGTGGC GGATGTGATC
CGGGCATTTC GCGCGCTGGT CGCGAAATTC AAGGGCGAGG CCACGGCGGA GGTTACCGTC
GCGGAGAAGC TTAACGACAA GAATCTGGAC GCGCTGAAGG CCGCGCTGAA ATCAGTGACG
GGCAAGGACA TCACGCTCAA CGTGAAAGTC GATCCGTCCA TCATCGGCGG GCTTGTCGTC
AAGCTCGGCA GTCGCATGGT GGACACCTCG CTCCGGACCA AACTCAATTC GATCAAGCAC
GCGATGAAAG AGGCAGGCTG A
 
Protein sequence
MAAVDPSVSG VSGRYATALF ELAREDKSID AVKADLDKFD AMLAESPELV RLVRSPVFSA 
DTQSKALAAV LSKAGIGGTT ANFLKVLAAN RRLFAVADVI RAFRALVAKF KGEATAEVTV
AEKLNDKNLD ALKAALKSVT GKDITLNVKV DPSIIGGLVV KLGSRMVDTS LRTKLNSIKH
AMKEAG