Gene Nwi_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0428 
Symbol 
ID3676602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp483277 
End bp483783 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content65% 
IMG OID637711968 
Productrare lipoprotein A 
Protein accessionYP_317047 
Protein GI75674626 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.480759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCACT CGCGAAAGAC GACGCTAGCG TTTCTTATCC GGCCGCGTAC CTTGGCCGCT 
GTGATGACCG CGAGCGTCTT GATTGCAGGC GGCGTCACCG AGGCTTCGGC CGGGTCGCGC
AACCATCATC GTCATCATCA CCAGGGACAT CATGCGAAGA GCCACGGCGC CGGCGGGCCT
GCCTGGACGA ACGCAAATGC GTCCCTCGAA CGTTCTGCCC GTTCGAACCG ATCGTTTTCA
GGCGTGGCCT CTTATTATGG CAATGAGGCC GGCAACCGCA CCGCGTCCGG CCAGCGCTTC
AACCAGAACG CCATGACCGC CGCCCATCGC AGCCTCCCGT TCGGGACCAG GCTGAGGGTC
ACCCATGGCA GCCGCAGCGT GGTCGTCACC ATCAACGATC GCGGTCCGTT CATCCGCGGC
CGCGTGCTGG ACCTTTCAAA AGGCGCCGCC CACGCGATCG GTCTGACCGG CCGCGGCGTC
GGCCGTGTGG TTGCCGAGGT CATGTAG
 
Protein sequence
MLHSRKTTLA FLIRPRTLAA VMTASVLIAG GVTEASAGSR NHHRHHHQGH HAKSHGAGGP 
AWTNANASLE RSARSNRSFS GVASYYGNEA GNRTASGQRF NQNAMTAAHR SLPFGTRLRV
THGSRSVVVT INDRGPFIRG RVLDLSKGAA HAIGLTGRGV GRVVAEVM