Gene Nwi_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0423 
Symbol 
ID3676597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp476388 
End bp477662 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content64% 
IMG OID637711963 
Productdihydrolipoamide succinyltransferase 
Protein accessionYP_317042 
Protein GI75674621 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID[TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGA TACGGGTTCC GACGCTCGGC GAATCGGTGA CCGAGGCGAC CATCGGAAAA 
TGGTTCAAGA AACAAGGCGA CGCCGTATCC GTCGACGAGC CGCTCGTCGA ACTCGAAACC
GACAAGGTAA CCATCGAAGT GCCCGCGCCG TCCGCCGGCA CGCTCGCCGA ACTCGTCGCC
AGGCAGGGCG AGACGGTGGC CGTCGGCGCG CTGCTCGGAC AGATCACCGA AGGCGGCGCG
CCGGCAAAGC CAGCGGCGGC CAAGACGCAA GGGATCAGTG CCGAAAGCAC GACCGGGCGG
CCGGACCTTA AGTCCGACAC CACGACACCG ATCAACGCTG GCCCGGAAGA ACCGCGGCCG
AGAGCGGAAG CCGACGCGCC GCTAGCGCCC TCGGTGCGCA AACTCTCCGC TGAGAGCGGC
ATCGACGCTT CCACCGTGTC GGGCTCCGGC AAGGATGGCC GCGTCACCAA GGGCGATATG
CTGGCGGCGA TCGAGAAGGC TGCGTCGGCG CCGACCCCGG TCGACCAGCC GGCTGCCGCC
GTGCAGGTGC GCGCGCCTTC TCCGGCGGAC GACGCCTCGC GCGAGGAGCG CGTGAAGATG
ACGCGGCTGC GCCAGACCAT CGCGCGCCGC CTCAAGGATG TGCAGAACAC CGCCGCGATT
CTGACGACCT TCAACGAAGT CGATATGAGC GGCGTCATGG CGCTTCGCGC GCATTACAAG
GACGTGTTCG AGAAGAAGCA TGGCGTGAAG CTCGGCTTCA TGGGCTTCTT CACCAAGGCC
ATCGTGCAGG CGTTGAGGGA CATTCCGGCG GTCAATGCCG AAATCGACGG CAGCGACCTG
ATCTACAAGA ACTACTATCA CATCGGAATC GCCGTCGGCA CCGACAAGGG ACTGGTGGTG
CCCGTGGTGC GCGACTGCGA TCAAAAATCG ATCGCCGAGA TCGAGAAGAG CGTCGCCGAC
TACGGCCGCC GCGCCCGCGA CGGTCAGCTC AAGATAGAGG AAATGCAGGG CGGCACCTTC
ACCATCACCA ACGGCGGCAT CTACGGCTCG CTGATGTCGA CGCCGATCCT GAATGCGCCG
CAGGCCGGCA TTCTCGGCAT GCACAAGATT CAGGAACGGC CGGTGGCGAT CGGCGGCAAG
GTGGAAATCC GGCCGATGAT GTATCTCGCT CTCTCTTATG ATCACCGCGT CATCGACGGC
AAGGAGGCCG TCACCTTCCT TGTGCGCGTC AAGGAATCGC TCGAAGATCC GGCACGGCTG
GTGCTGGATC TGTAA
 
Protein sequence
MTEIRVPTLG ESVTEATIGK WFKKQGDAVS VDEPLVELET DKVTIEVPAP SAGTLAELVA 
RQGETVAVGA LLGQITEGGA PAKPAAAKTQ GISAESTTGR PDLKSDTTTP INAGPEEPRP
RAEADAPLAP SVRKLSAESG IDASTVSGSG KDGRVTKGDM LAAIEKAASA PTPVDQPAAA
VQVRAPSPAD DASREERVKM TRLRQTIARR LKDVQNTAAI LTTFNEVDMS GVMALRAHYK
DVFEKKHGVK LGFMGFFTKA IVQALRDIPA VNAEIDGSDL IYKNYYHIGI AVGTDKGLVV
PVVRDCDQKS IAEIEKSVAD YGRRARDGQL KIEEMQGGTF TITNGGIYGS LMSTPILNAP
QAGILGMHKI QERPVAIGGK VEIRPMMYLA LSYDHRVIDG KEAVTFLVRV KESLEDPARL
VLDL