Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0412 |
Symbol | |
ID | 3676997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 460680 |
End bp | 461531 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637711952 |
Product | transcription factor CarD |
Protein accession | YP_317031 |
Protein GI | 75674610 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.595911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAGCA AGACCGCCAG AGCGTCCGCA AACACCGCTA CCTCGAAGAC CGCCGCTTCG AAGACTGTTG CTTCTGCTTC GAAGACCGCT GCTTCGAAAG CCGGCTCGAG GACGACTGCT TCCAAGATCG CTTCCGCCCC GAAGGTAGGT TCCAGGACCT CTGTCAAGCC GACGGCGAAG TCCGCAGCGA AGGCGGCTGT GGCCAGTAAG CCGGCGGTGA AGCCGGTTGC CAGGGTGGGC GCGCGCGTGG AGGAGCCGAA GAAGGTTCTG ACCCAGCGCC AGGGGTTCAA GACCGGCGAG TTCGTGGTCT ATCCCGCGCA TGGTGTCGGC CAGATTCTGG CGATCGAAGA ACAGGAGATT GCTGGCGCCA AGCTTGAGCT GTTCGTTATC AACTTCATCA AGGACAAGAT GACTCTGCGG GTGCCGACGG CGAAGGTTGC CAATGTCGGG ATGCGTAAGC TGTCCGAGCC GGGTCTGGTC AAGCGGGCGC TCGAAACCCT GAAGGGCCGC GCGCGCATCA AGCGCACCAT GTGGTCGCGG CGGGCGCAGG AGTATGAAGC GAAGATCAAT TCCGGGGATA TTGTCGCGAT CGCCGAAGTG GTACGCGATC TCTATCGATC GGAATCCCAG CCGGAGCAGT CCTACAGCGA ACGTCAGCTT TACGAAGCCG CGCTTGATCG CCTATCACGC GAGATCGCGG TCGTTCAGCA CGTGACGGAG ACCGAAGCGG TCAAGGAAAT CGAGGGTCAA CTGGCCAAGA GCCCGCGGCG TGGCGCCAAG GCGGAGGCGG GCGGCGAGGC TGACGGCGAC CTGGAAGCAG CCGATGGCGA TGATGCCGCC GTTGCTGCTT AA
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Protein sequence | MPSKTARASA NTATSKTAAS KTVASASKTA ASKAGSRTTA SKIASAPKVG SRTSVKPTAK SAAKAAVASK PAVKPVARVG ARVEEPKKVL TQRQGFKTGE FVVYPAHGVG QILAIEEQEI AGAKLELFVI NFIKDKMTLR VPTAKVANVG MRKLSEPGLV KRALETLKGR ARIKRTMWSR RAQEYEAKIN SGDIVAIAEV VRDLYRSESQ PEQSYSERQL YEAALDRLSR EIAVVQHVTE TEAVKEIEGQ LAKSPRRGAK AEAGGEADGD LEAADGDDAA VAA
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