| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0396 |
|---|
| Symbol | aroB |
|---|
| ID | 3676981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 443296 |
|---|
| End bp | 444447 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637711936 |
|---|
| Product | 3-dehydroquinate synthase |
|---|
| Protein accession | YP_317015 |
|---|
| Protein GI | 75674594 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0337] 3-dehydroquinate synthetase |
|---|
| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.553566 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTC CGATCAAAGA ATCAGACCCG ATCACGGTCG ATGTCGCGCT CGGTGAGCGC
TCCTACGACA TTGTCATCGG ACGAGGCGTC CTGCCGTCGC TGGGCGAGCG GATCGCCGCG
TTGCGTCCCG GCGCGCGCGT CGCCGTCGTC ACCGACGCCC GTGTCGCCAC CCATTGGCTT
CAGCGAACCG AGGCATCGCT GACCGGCGCC GGTCTTACAA CCTCGCGGAT CGTCGTCGAC
GAAGGCGAGG TTTCGAAGAG CTACGCGGGC GTTGAATTTG TCTGTGAGGA ACTGATCAAG
GCCAGAATCG AGCGCAACGA TCTTGTGGTC GCGCTTGGCG GCGGCGTGGT CGGCGATCTC
GCGGGCTTCG CCGCCGCGAT CGTACGCCGT GGTGTCGATT TCGTGCAGGT GCCGACGTCG
CTGCTGGCGC AGGTGGATTC GTCCGTGGGC GGCAAGACCG GCATCAACTC GCCGCAGGGC
AAGAATCTGG TCGGCGCCTT TCACCAGCCG ATCCTGGTGG TGGCGGACAC CGCCGTGCTG
GATACCTTGT CGCCGCGCCA GTTTCGCGCC GGTTATGCCG AAGTCGCCAA ATACGGACTG
ATCGGCGATG AGGCGTTCTT CGCGTGGCTG GAGGTCCACC ATGCCGATAT CGTCAAGGGT
GATGCGGCGC GCGAGCACGC GGTCGCCACC AGTTGCCGCG CCAAGGCTGC CATCGTCGCC
CGCGACGAGC GCGAGAGCGG CGAGCGCGCG TTGCTCAATC TCGGTCATAC CTTCGGCCAC
GCGCTGGAAG CGGCGACCGG ATTTTGCGGG CGCCTTTATC ACGGCGAGGG TGTTTCGATC
GGCATGGTGC TGGCCGCCGA ACTCTCGGCG CAGCTCGGAA TGATAGCGGC CGCCGACGTG
TCCCGTATCG AGAGGCATCT GGCGGCGGCG GGTCTGCCGA CGCGCTTGCA GGACATCGCC
GGCTTCAGGC AGGAGGGCCT GGCCGATGCG GATGCGCTGA TGACGCTGAT GGCGCAGGAC
AAGAAGGTCA GGCGCGGCCG GCTGACCTTC ATCCTGCTGA AGGCGATCGG TCAGGCGGTG
GTGTCGTCGG ACGTCGAGCC GTCGATGGTT CGGGATTTTC TCGCCCGCAA GCTGGCGGAC
GCGCCGGCCT AG
|
|---|
| Protein sequence | MTIPIKESDP ITVDVALGER SYDIVIGRGV LPSLGERIAA LRPGARVAVV TDARVATHWL
QRTEASLTGA GLTTSRIVVD EGEVSKSYAG VEFVCEELIK ARIERNDLVV ALGGGVVGDL
AGFAAAIVRR GVDFVQVPTS LLAQVDSSVG GKTGINSPQG KNLVGAFHQP ILVVADTAVL
DTLSPRQFRA GYAEVAKYGL IGDEAFFAWL EVHHADIVKG DAAREHAVAT SCRAKAAIVA
RDERESGERA LLNLGHTFGH ALEAATGFCG RLYHGEGVSI GMVLAAELSA QLGMIAAADV
SRIERHLAAA GLPTRLQDIA GFRQEGLADA DALMTLMAQD KKVRRGRLTF ILLKAIGQAV
VSSDVEPSMV RDFLARKLAD APA
|
|---|
| |