Gene Nwi_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0369 
Symbol 
ID3674923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp414108 
End bp415943 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content67% 
IMG OID637711909 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_316988 
Protein GI75674567 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.797615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CTGGCCATCC CCCGACGCTC CCCGATGATG CGGCCGGCCA GACCGGTCTC 
GACCTCGGCG GGACGCCATC CGGATCGAGC GTGCAGTACC GGGTGCTGGC ACGCAAATAC
CGCCCGGCCT GCTTCGATGA TCTCATCGGG CAGGAGGCGC TGGTGCGCAC CGTGTCCAAT
GCGTTCGAGA CGGGACGGAT TCCGCAGGCC TGGATTCTGA CGGGCGTGCG CGGCGTGGGA
AAAACCACCA CCGCGCGCAT TCTTGCCCGT GCGCTGAACT ACCAGCTCGC GGATGGTTCC
GTGCAGGGGC CGACCATCCG GATGCCGCAA CTTGGCGTTC ATTGCCGGGC CATTATGGAA
AGCCGGCATA TCGATGTGCT GGAGATGGAC GCCGCTTCTC ACACCGGTGT CGACGATGTC
AGGCAGATCA ACGACAGCGT GCGCTATGCG CCGTCGAGCG CGCGCTACAA GGTCTACATC
ATCGACGAAG TTCACATGCT GTCGACGGCG GCCTTCAACG CGTTCCTGAA GACGCTGGAG
GAGCCGCCGG AGCACGCGAA GTTCGTGTTC GCGACCACTG AGATCCGCAA AGTTCCGGTG
ACGGTGCTGT CGCGCTGCCA GCGATTTGAC CTCCGGCGGG TCGAAGCCGA GGTGTTGATG
GCGCACCTTG CCGCTATCGC GGCGAAAGAG AACGTCGAGG CGGAGCCGGA GGCGCTTGGC
ATCCTGGCGA GGGCGGCCGA AGGCTCGGTG CGCGATTCCC TGTCGCTGCT CGATCAGGCC
ATCGCCCATG CGGCTGGCGT GGTCCGGGCC GATGCGGTGC GGCGGATGCT GGGACTTGCG
GACCGCACGC GGGTCATCGA TCTGTTCGAG GCGCTGGCGC GGGGCGACAT CGCGAGCGCA
TTCGGTGAGT TCCGTTCCCA ATACGAGACC GGCGCCGATC CGGTCGTCGT GCTCAGCGAC
CTGGCCGAAT TCGTCAACTT CGTGACGCGC ATCAAGATCG TTCCGGCGAT CGCCGACAAC
GTGGCATTCG GTGAAGCGGA ACGCCTGCGG GCGAGCGATT TTGCCGTGAA ACTGTCGATC
CGCGTGCTGT CGCGGATGTG GCAGATGCTG CTGAAAGGAA TCGCGGAAGT TCAGGGCGCG
ACGCGGCCGG CGGCCGCGGC TGAGATGGTG CTGGTGCGCA TCGCCTATGT TGCGGACCTG
CCGACGCCCG ATGAGGCGAT CCGGCTGCTG GATCGAAATG GCGAATCGCC GGGTGTTACT
ACCAACGCCG CGCCGCCCAG ACCGGCCTCG GGACCGGTGT CATCCGTTCC GTCGTCGGCT
GCGCGGTCAT TGTCGCCGCG CGCCGCCGCG GAGACGGCCC GTCCGCAGGC TGCCGCGCCG
ATGGCCGGCA CAGCGGGTGC GATCCCGGCG GTGCGGATAG AGAGCCTGGG CGAACTCGTG
GCGCTTGCCG GCGAAAAGCG CGATCTGATC ATCAAGGCCG CGCTGGAGGC CGACATCCGG
CTGGTCCGCA TCGAGAACGG CCGGCTTGAG GTCGCGCTGG AGCGCAGCGC GGCGCGTACG
CTGGTGAACG ATCTTGGGCG CAAGCTGGAA CAATGGACCG GCCGGCGCTG GACGGTGATC
GTTTCCAATG AGCCGGGCCA GCCGACACTG CGTTCGCAGG CGCTGTTGCA GAAGAGCGAG
CGGGAGCGCG CGGCCGAGGC TGATCCGCGC GTTCAGGACG TGCTGGCGCG TTTTCCTGGC
GCCAAGGTGG TCGAGGTGCG AAAGTTCGCG TTGTCGTCGC CGGATTCCGA TGCCGCTCCT
GACGAACTGG CCGACGATCT CGACAGCGGC GACTAG
 
Protein sequence
MNDAGHPPTL PDDAAGQTGL DLGGTPSGSS VQYRVLARKY RPACFDDLIG QEALVRTVSN 
AFETGRIPQA WILTGVRGVG KTTTARILAR ALNYQLADGS VQGPTIRMPQ LGVHCRAIME
SRHIDVLEMD AASHTGVDDV RQINDSVRYA PSSARYKVYI IDEVHMLSTA AFNAFLKTLE
EPPEHAKFVF ATTEIRKVPV TVLSRCQRFD LRRVEAEVLM AHLAAIAAKE NVEAEPEALG
ILARAAEGSV RDSLSLLDQA IAHAAGVVRA DAVRRMLGLA DRTRVIDLFE ALARGDIASA
FGEFRSQYET GADPVVVLSD LAEFVNFVTR IKIVPAIADN VAFGEAERLR ASDFAVKLSI
RVLSRMWQML LKGIAEVQGA TRPAAAAEMV LVRIAYVADL PTPDEAIRLL DRNGESPGVT
TNAAPPRPAS GPVSSVPSSA ARSLSPRAAA ETARPQAAAP MAGTAGAIPA VRIESLGELV
ALAGEKRDLI IKAALEADIR LVRIENGRLE VALERSAART LVNDLGRKLE QWTGRRWTVI
VSNEPGQPTL RSQALLQKSE RERAAEADPR VQDVLARFPG AKVVEVRKFA LSSPDSDAAP
DELADDLDSG D