Gene Nwi_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0329 
Symbol 
ID3676158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp369511 
End bp371535 
Gene Length2025 bp 
Protein Length674 aa 
Translation table11 
GC content65% 
IMG OID637711869 
Productcarbohydrate-selective porin OprB 
Protein accessionYP_316948 
Protein GI75674527 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGGGA TTCGATCAAA CAGGCCTCGG CAAATCCAGC CGGCGCAGGC GTTGAAGCGG 
GCGACATGCG CCCTCGCCGG CCTTGCGGCG AGCCTGCTGG CGCAGAACGG GTTCGCGCAG
GCGGCGGACT TTCCCGCGGT CAGGAAAGCG CGCCCCCTGA CCGCCATCGA CTGGTCCGGC
TTTTATGTCG GCGGCCACGC CGGATTTGGT GGCGGCCGAT CGGCCGCGAC ACTCTTCGAT
CCCGCACCGG CCGCCGGCCG CAACGTGTTC GGCGGACTGA TCGGCGGCAT TCAGGCCGGC
TACAATGTCC GGCTGCCGTC GGGGCTGCTG CTCGGCCTTG AAGCCGACGT CTCGTTTCCG
AGCTACATCG AGTCCAATTC GTTCGTCTCA GGGCTCGCGA CAGCGCGTTC CGACATCACG
CACCAATGGG ATTTCATCGG AACGGCGCGC GCGCGGTTCG GCTATGCCGC GGGTCCCTGG
CTTGCCTACG CCACCGGCGG CCTCGCCTTC GCCGGCGACC GCTATCTGAA CGATCTTCCC
TCGGGCGATC AGGAGAAGAT GCTGGATGCC CGCTTCGGCT GGGTCGCCGG CGCGGGGCTT
GAATACGCCT TCGCGCCATA CTGGAGCGCG CGGCTTGAAT ACCTCCACTA TCAATTCGAG
GGAACGGGCG TTCAGTTTCC GTCGGCCGCG CAATATGCCG CGACCATGAA CTTTCAATCG
ATCCGCGTCG GCCTCAACCG CAGGCTCGGC GGATCATTGC CGGGCACGGG CCCGGCGGAG
CCGCCGGCCG GCCTGGAATC CGACCGCTGG GAGGTTCACG GCCAGACCGT CTATCTCGGA
CAGGGGTATC CGTCCTTCCG CGCGCCCTAC AGCGGCCCCA ACAGCCTGAG CCCGGCCGCA
CAGCATCAGG CGACGTGGAG CAACGCGCTG TTTCTGAACG CACGCCTCTG GGACGGCGGT
GAAGTCTACT ACAATCCCGA ACTGCTTCAG GGTTTCGGCC TCAGCGACAC CGTCGGCGTC
GCGGGCTTTC CGAGCGGCGA GGCGCAAAAA TCCAACTTCC CCTATCCGCG CTACAACACC
TCGCGGCTGT TCGTGCGCCA GACCTTCGGT TTCGGCGGAG AGCAGGAAGA CCTGGCAAGC
GATCCGGGGC AGATCGCGGG CAAGGCCGAT ATCTCGCGAC TGACGTTGCA AGCCGGCAAG
ATGGCGGTCA TCGACATGTT CGACGGCAAC GTTTATGCCA AGGACACCCG CGCTGATTTC
ATGAATTGGT CACTGTGGGC GCCGGGCGCC TTCGACTATG CCGCCGACAG GCTCGGGTTG
ACCTACGGCG TGACTGCCGA ACTCAATCAG AAACAGTGGG CGCTGCGCGG CGGCTATTTC
CTGATGAATT CGGAATCGAA CGCCGACAGT TTCGACACCC AGGTGTTCCG GCGCGGCGAG
TATGTGGTGG AACTGGAGAC ACGCTTCTCT CTGTTCGGCC GGCCCGGCAG GCTCCGCTCC
CTCGGCTGGC TCAACAGCGC CTTCATGGGC AGCTATCGTG AAGCGCTGAA CGATCCCGCC
AATCTCGATA TCTCGCGGAC CCGCATGGGC CGGATCAAGT ACGGATACGC CATCAACGTC
GAGCAGGCCG TCACCGACGA CATCGGGCTA TTCGGCCGCT GGAGCTGGAA TGACGGCCGG
ACCGAGATCA TGGCGTTCAC CGACATCGAC GCCAGCCTCT CGCTCGGGAC CTCGATCAAG
GGAACAGGCT GGGGCCGGCC GGAGGATACG ATCGGCATCG GCGGCGCGAT CAACGCGCTG
TCACGCGATC ATCGCGACTT CATCGCCGCC GGCGGCCTCA GCGTTCTGAT CGGCGACGGC
CGGCTCAACT ATCGCCGCGA GCGCATACTG GAGACGTATT ATGCCTTTGC GCTGAACCGG
TGGGTCACCC TGACGGCGGA CTATCAGTTC ATCACGAACC CTGGCTATAA CGCCGATCGT
GGTCCTGTGC ATGTGTTCTC CGGACGGCTG CGCGGGGAGT TTTAA
 
Protein sequence
MKGIRSNRPR QIQPAQALKR ATCALAGLAA SLLAQNGFAQ AADFPAVRKA RPLTAIDWSG 
FYVGGHAGFG GGRSAATLFD PAPAAGRNVF GGLIGGIQAG YNVRLPSGLL LGLEADVSFP
SYIESNSFVS GLATARSDIT HQWDFIGTAR ARFGYAAGPW LAYATGGLAF AGDRYLNDLP
SGDQEKMLDA RFGWVAGAGL EYAFAPYWSA RLEYLHYQFE GTGVQFPSAA QYAATMNFQS
IRVGLNRRLG GSLPGTGPAE PPAGLESDRW EVHGQTVYLG QGYPSFRAPY SGPNSLSPAA
QHQATWSNAL FLNARLWDGG EVYYNPELLQ GFGLSDTVGV AGFPSGEAQK SNFPYPRYNT
SRLFVRQTFG FGGEQEDLAS DPGQIAGKAD ISRLTLQAGK MAVIDMFDGN VYAKDTRADF
MNWSLWAPGA FDYAADRLGL TYGVTAELNQ KQWALRGGYF LMNSESNADS FDTQVFRRGE
YVVELETRFS LFGRPGRLRS LGWLNSAFMG SYREALNDPA NLDISRTRMG RIKYGYAINV
EQAVTDDIGL FGRWSWNDGR TEIMAFTDID ASLSLGTSIK GTGWGRPEDT IGIGGAINAL
SRDHRDFIAA GGLSVLIGDG RLNYRRERIL ETYYAFALNR WVTLTADYQF ITNPGYNADR
GPVHVFSGRL RGEF