Gene Nwi_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0322 
Symbol 
ID3676151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp357975 
End bp358577 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content69% 
IMG OID637711862 
Productcytochrome c biogenesis protein CcmA 
Protein accessionYP_316941 
Protein GI75674520 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component 
TIGRFAM ID[TIGR01189] heme ABC exporter, ATP-binding protein CcmA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTTT CAGGGAACGG ATTGCGATGC GTCAGAGGAG GACGGGAGGT GTTCTCCGGC 
CTCGATGTGG CGGCGGAGTC GGGCCACGCC GTGGCGATCA CCGGCCCTAA CGGCGCGGGG
AAAACGTCCC TGCTCCGGCT GCTCGCGGGT CTTTTGGCGA TAGCGGACGG GTCGATCAGC
CTTGAAGGCG GCGATCCCGA GTTGACGCTG CCGGAACAGG CGCATTACCT CGGCCATCGC
GACGCCCTCA AGCCTGCGCT CACGGTCAGC GAAAACCTGT CGTTCTGGCG GGATTTCCTC
GGCGGCGGGA AATCGGGCGA ATCGGATGCG CTCGCGGCGG TCGGGCTCGA CCATGTCGCG
CATCTGCCGG CGGCCTATCT CTCGGCCGGA CAGCGGCGAC GGCTGTCCAT CGCACGGCTC
CTGGCCGTCA AGCGCCCGGT CTGGCTGCTG GACGAACCGA CCTCGGCCCT CGACGTCACC
GGTCAGGCCG CCTTCGCCGC GATCATGACC GGCCATCTCG CGGGCGGCGG CATCATTCTG
GCCGCGACCC ATACGCCGCT CGGCATCGCC GCGCGGGAAC TGCGGATCGG AGGCGCGGCA
TGA
 
Protein sequence
MRLSGNGLRC VRGGREVFSG LDVAAESGHA VAITGPNGAG KTSLLRLLAG LLAIADGSIS 
LEGGDPELTL PEQAHYLGHR DALKPALTVS ENLSFWRDFL GGGKSGESDA LAAVGLDHVA
HLPAAYLSAG QRRRLSIARL LAVKRPVWLL DEPTSALDVT GQAAFAAIMT GHLAGGGIIL
AATHTPLGIA ARELRIGGAA