Gene Nwi_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0321 
Symbol 
ID3676150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp357233 
End bp357901 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content70% 
IMG OID637711861 
Productcytochrome c-type biogenesis protein CcmB 
Protein accessionYP_316940 
Protein GI75674519 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR01190] heme exporter protein CcmB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC TCGCCGCCGT GATCCGCCGG GATGTGCGCG TCGCGCTGCG CGTCGGCGGC 
GGCGCGCTGA TCGGGGTGCT GTTTTTCCTG ACCGTCGTGG TGCTGATGCC GTTCGCGGTC
GGCCCCGATC TCGCGCTCCT GAAAAAACTC GGGCCCGCGA TTCTCTGGCT CGGCGCGCTG
CTGGCGAGCC TGCTGACGCT CGATCGCCTG TTCACCGCCG ATCACGATGA TGGTTCGCTT
GACCTGATCG TCATGGGCCG CACGCCGCTC GAACTCGTCT GCGCCGCGAA GGCGCTGGCG
CACTGGCTGG CCGTAGGGTT GCCGCTGGTC GCCGCGACGC CCGTGCTGGG GTTGCTGCTC
AACCTGGACG CCGTCGCGAC CGGTGCCGTG GCGCTGACGC TCCTTGCGGG AACGCCGGCG
CTCACCTTCA CGGGAATGGT CGGCGCCGCC CTCGCCGTCG TCCTGCGCCG CGGCGGGCTG
CTGCTCTCGG TGCTGGTGCT TCCGCTGTCG ATCCCGGTTC TGATTTTCGG CGTCGCCGCT
TCCAATGCCG CGATGTCCGG ACCATCGCCG TTCGGCACTC CGTTCTCGAT TCTGTGCGCG
CTGTCGCTGG CGAGCCTGGT CATCGGTCCG TTCGCCGCCG CCTCAAGCCT GCGGCACGGG
CTGGATTGA
 
Protein sequence
MTALAAVIRR DVRVALRVGG GALIGVLFFL TVVVLMPFAV GPDLALLKKL GPAILWLGAL 
LASLLTLDRL FTADHDDGSL DLIVMGRTPL ELVCAAKALA HWLAVGLPLV AATPVLGLLL
NLDAVATGAV ALTLLAGTPA LTFTGMVGAA LAVVLRRGGL LLSVLVLPLS IPVLIFGVAA
SNAAMSGPSP FGTPFSILCA LSLASLVIGP FAAASSLRHG LD