Gene Nwi_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0320 
Symbol 
ID3676149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp356406 
End bp357137 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID637711860 
Productcytochrome c-type biogenesis protein CcmC 
Protein accessionYP_316939 
Protein GI75674518 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR01191] heme exporter protein CcmC 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGA TTGACCTCGC CAACCCCTCC CGGTTTCTCA CGCTTGCCGG CCGGATTCTG 
CCGTGGCTCG TGGCGGTCAC CGCGCTCGTG CTCGCGGTCG GCCTCTACCA GTCCGCCATC
GCGCCCGATG ACTATCAGCA GGGCGCGACC GTGAAGATCA TGTTCATCCA CGTTCCGAAT
GCGTGGCTGT CGATGTTCGT GTGGGGCGTG ATGAGCGTCG CGGCGCTGGG CACGCTGGTG
TGGCGGCATC CGCTGGCCGA CGTCGCGGCC AAGACCGCAG CGCCGATCGG CGCGGCCTTC
ACATTTCTCG CGCTGCTGAC GGGATCGCTG TGGGGCCGAC CGATGTGGGG CACCTATTGG
GAATGGGATG CGCGGCTGAC CTCGGTTTTG ATCCTGTTCC TGATGTATCT TGGCCTGATG
GCGCTATGGC GCGCGGTCGA GGATCCGTCG CGCGCCGCGC GCGCCGCCGC GGTGCTGACG
CTGGTCGGCT CGGTCAACAT TCCCATCATC AAGTTCTCGG TCGACTGGTG GAATACGCTG
CATCAGCCGG CCTCGGTGGT GCGCATGGGC GGCTCGACGC TCGACCGCGC CTTCCTGATT
CCCCTCGTGG TGATGGCGAT CGGCTTCACC CTGCTGTTCC TGACGCTGCA TATCGCGGCG
ATGCGGAATG AAATCCTGCG CCGGCGCGTG CGCACCTTGC AGATGCTGCA AGCCAGCAAA
TCGGTGGCGT GA
 
Protein sequence
MSLIDLANPS RFLTLAGRIL PWLVAVTALV LAVGLYQSAI APDDYQQGAT VKIMFIHVPN 
AWLSMFVWGV MSVAALGTLV WRHPLADVAA KTAAPIGAAF TFLALLTGSL WGRPMWGTYW
EWDARLTSVL ILFLMYLGLM ALWRAVEDPS RAARAAAVLT LVGSVNIPII KFSVDWWNTL
HQPASVVRMG GSTLDRAFLI PLVVMAIGFT LLFLTLHIAA MRNEILRRRV RTLQMLQASK
SVA