Gene Nwi_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0316 
Symbol 
ID3676145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp353924 
End bp354871 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content66% 
IMG OID637711856 
Productcell division transporter substrate-binding protein FtsY 
Protein accessionYP_316935 
Protein GI75674514 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA GTTCCGAGGA TCAACCGAAA CAGAGCTGGT GGCGCAGGCT GTCCGGCGGC 
CTCAAGCGGA CTTCCGCTTC GCTCGGGACG GCGGTGGCCG ATCTCGTCAC CAAGCGCAAG
CTCGACCGCG CCATGCTCGA TGATATCGAG GACGTCCTGC TGCGCGCCGA CCTCGGAACC
GCGGTCGCCG AACGCATCGC GGAGGCGGTC GGCGAGGGAC GCTATGACAA GGCGATCTCC
GCCGACGAGG TGAAGGCCGT CGTCGCGACC GAAGTGGAAA AAGTCCTCGC TCCGGTGGCG
CGGCCGCTGA TCATCGACGA AACGGTCAAG CCGTTCGTTA TTCTGGTGGT CGGCGTCAAC
GGCTCCGGCA AGACTACGAC CATCGGCAAG CTGGCGGCGA AGTTGTCCGC CGAGGGGCGC
AAGGTGATGA TGGCGGCCGG CGACACGTTT CGCGCCGCGG CGATCGACCA GTTGAAGGTC
TGGGGCGAGC GAACCGGATC GCCGGTGATC GCGGGCGCGC AAGGATCGGA TTCCGCGAGC
CTGGCGTTCA ACGCGCTGAC CGAGGCGCGA AACCAGAACA GCGACGTGCT GCTGATCGAC
ACCGCGGGCC GCCTGCAGAA CAAGGCGGAG CTGATGAACG AACTGGAAAA GATGGTTCGC
GTCATCCGCA GGGTCGATTC GTCGGCTCCG CATGTCGTGT TGCTCGTGCT CGACGCCACG
GTCGGACAGA ACGCGCTGTC GCAGGTCGAG GCGTTTCATC GCACCGCCGG CGTCACCGGG
CTGGTGATGA CCAAGCTGGA CGGCACGGCG CGCGGCGGCA TTCTGGTGGC GCTCGCGGAG
AAGCATAAGC TGCCCGTGCA CTTCATCGGC GTCGGCGAAG GAGTGGACGA CCTCGCGCCG
TTTACGGCAG GCGATTTCGC GCGGGCGGTC GCGGGGATCG AGCATTAG
 
Protein sequence
MSDSSEDQPK QSWWRRLSGG LKRTSASLGT AVADLVTKRK LDRAMLDDIE DVLLRADLGT 
AVAERIAEAV GEGRYDKAIS ADEVKAVVAT EVEKVLAPVA RPLIIDETVK PFVILVVGVN
GSGKTTTIGK LAAKLSAEGR KVMMAAGDTF RAAAIDQLKV WGERTGSPVI AGAQGSDSAS
LAFNALTEAR NQNSDVLLID TAGRLQNKAE LMNELEKMVR VIRRVDSSAP HVVLLVLDAT
VGQNALSQVE AFHRTAGVTG LVMTKLDGTA RGGILVALAE KHKLPVHFIG VGEGVDDLAP
FTAGDFARAV AGIEH