Gene Nwi_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0314 
Symbol 
ID3676143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp351424 
End bp352854 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content65% 
IMG OID637711854 
ProductDEAD/DEAH box helicase 
Protein accessionYP_316933 
Protein GI75674512 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAA GCAACCTTTT GTCCTCCTTT CAGGATTTCG GCCTCGCCGA TCCGATTTCA 
CGTGCGCTCG CGGAAGAGAA TTATCTGACG CCCACGCCCA TCCAGGCTCA AACCATCCCT
ATTGCCCTCA CCGGACGCGA CCTTGTCGGA ATTGCCCAGA CCGGCACCGG CAAGACCGCG
GCCTTCGCGT TGCCGATCCT GCATCGGCTG CTTCAGAATC GAATCAAGCC GCAACCCAAG
AGCTGCCGGG TTCTGGTGCT CAGCCCGACG CGCGAACTTT CAGGCCAGAT TCTCGAAAAC
TTCAACGCCT ACGGCCGGCA CCTGCGCCTG ACCTCGGCCC TCGCGATCGG CGGGGTCCCG
ATGGGACGTC AGGTCCGCGC CGTGATGCAT GGCGTCGAGG TGATGGTCGC AACGCCGGGC
CGCCTGCTCG ATCTCGTTCA AAGCAACGGG CTGAAACTCG GTCAGGTCGA ATTTCTGGTG
CTGGACGAAG CCGATCGCAT GCTCGACATG GGCTTCATCC ACGACATCCG CAAAGTCGTC
GCCAAGCTGC CGGCGAAGCG GCAGACGCTG TTTTTCTCGG CCACCATGCC GAAGGACATC
GCGGAACTCG CCAACCAGAT GCTGCGCGAC CCGGCCCGCG TCGCGGTTAC GCCGGTCTCC
TCGACCGTGG ACCGCATCAC CCAACGCATC ATTCAGGTCG ATCATGCAGG CAAGGCCGCG
TTCCTGGCCC AGCTTCTGAA GCAGGAACCG GTCAACCGGG CGCTGATCTT CACGCGGACC
AAGCACGGCG CCGACAAGGT CGTGAAAAGC CTCGCCAAGT CCGGCATCAG GTCCAACGCG
ATCCACGGCA ACAAATCGCA GAACCACCGC GAACGGGTGC TGGCGGAGTT TCGGGCCGGC
GAGATCCGGA CGCTGGTTGC GACCGACATC GCGGCACGGG GCATCGACGT CGACGGGATC
AGCCACGTCG TCAATTTCGA CCTCCCGAAC GTCCCGGAAA CCTACGTCCA CCGTATCGGC
CGCACCGCGC GGGCAGGCAC CGATGGCGCG GCGATCTCGC TGGTCGCCGG AGCGGAAGAG
ATGGCCTATC TCCGTGATAT CGAGAAACTG ATCCGCGTGG TCCTCCCAAG GGAAGACCGC
CGGACATCTG GGCAGCGTGA GGCGGCGCCG GCTCCCCAGC AAAATCGCGG CGGAAGCCCC
GCACCCCACG GTCATGCGGC CAGAGCGGGC GACGCCTCCT CGGGGAAAGG TTCCCGCCGT
CGCCGCAGCA AGAAGGGGAC GCCGCAAACC AGCCGGCGAC CGGAATCCGG CCGGCAGGAG
ACCTCCCGTT CAGCACCGGG GAGCAAGCCG GGTGGAATGC AGGGGGTTGC CTTCCTGCAC
CGCAAAAGCC GGCCCGCGCG ATTGAAATCC AGTCAGCCGC CTCAGCGCTA G
 
Protein sequence
MERSNLLSSF QDFGLADPIS RALAEENYLT PTPIQAQTIP IALTGRDLVG IAQTGTGKTA 
AFALPILHRL LQNRIKPQPK SCRVLVLSPT RELSGQILEN FNAYGRHLRL TSALAIGGVP
MGRQVRAVMH GVEVMVATPG RLLDLVQSNG LKLGQVEFLV LDEADRMLDM GFIHDIRKVV
AKLPAKRQTL FFSATMPKDI AELANQMLRD PARVAVTPVS STVDRITQRI IQVDHAGKAA
FLAQLLKQEP VNRALIFTRT KHGADKVVKS LAKSGIRSNA IHGNKSQNHR ERVLAEFRAG
EIRTLVATDI AARGIDVDGI SHVVNFDLPN VPETYVHRIG RTARAGTDGA AISLVAGAEE
MAYLRDIEKL IRVVLPREDR RTSGQREAAP APQQNRGGSP APHGHAARAG DASSGKGSRR
RRSKKGTPQT SRRPESGRQE TSRSAPGSKP GGMQGVAFLH RKSRPARLKS SQPPQR